BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035138
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33172.3| unnamed protein product [Vitis vinifera]              117   1e-24
ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like...   117   1e-24
dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [...   117   1e-24
gb|AFW70075.1| hypothetical protein ZEAMMB73_605375 [Zea mays]        117   1e-24
ref|XP_003574320.1| PREDICTED: splicing factor 3B subunit 3-like...   117   1e-24

>emb|CBI33172.3| unnamed protein product [Vitis vinifera]
          Length = 934

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/71 (74%), Positives = 62/71 (87%)
 Frame = +2

Query: 2    NGAPNKVEEIVQFHVGDTITCLEKTSLILGGHDCIVYGTVMGCIGALQALTFREDIEFFS 181
            NGAPNKVEEIVQFHVGD +TCL+K SLI GG +CI+YGTVMG +GAL A T R+D++FFS
Sbjct: 801  NGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECIIYGTVMGSLGALLAFTSRDDVDFFS 860

Query: 182  RLEMNMRQEHP 214
             LEM+MRQEHP
Sbjct: 861  HLEMHMRQEHP 871


>ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
          Length = 1214

 Score =  117 bits (293), Expect = 1e-24
 Identities = 53/71 (74%), Positives = 62/71 (87%)
 Frame = +2

Query: 2    NGAPNKVEEIVQFHVGDTITCLEKTSLILGGHDCIVYGTVMGCIGALQALTFREDIEFFS 181
            NGAPNKVEEIVQFHVGD +TCL+K SLI GG +CI+YGTVMG +GAL A T R+D++FFS
Sbjct: 1081 NGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECIIYGTVMGSLGALLAFTSRDDVDFFS 1140

Query: 182  RLEMNMRQEHP 214
             LEM+MRQEHP
Sbjct: 1141 HLEMHMRQEHP 1151


>dbj|BAD10377.1| putative splicing factor 3b, subunit 3, 130kDa [Oryza sativa Japonica
            Group] gi|42409258|dbj|BAD10521.1| putative splicing
            factor 3b, subunit 3, 130kDa [Oryza sativa Japonica
            Group] gi|125538000|gb|EAY84395.1| hypothetical protein
            OsI_05771 [Oryza sativa Indica Group]
          Length = 1234

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/71 (73%), Positives = 62/71 (87%)
 Frame = +2

Query: 2    NGAPNKVEEIVQFHVGDTITCLEKTSLILGGHDCIVYGTVMGCIGALQALTFREDIEFFS 181
            NGAPNKVEEIVQFHVGD +TCL+K SLI GG +C++YGTVMG +GAL A T RED++FFS
Sbjct: 1101 NGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTVMGSVGALLAFTSREDVDFFS 1160

Query: 182  RLEMNMRQEHP 214
             LEM++RQEHP
Sbjct: 1161 HLEMHLRQEHP 1171


>gb|AFW70075.1| hypothetical protein ZEAMMB73_605375 [Zea mays]
          Length = 1229

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/71 (73%), Positives = 62/71 (87%)
 Frame = +2

Query: 2    NGAPNKVEEIVQFHVGDTITCLEKTSLILGGHDCIVYGTVMGCIGALQALTFREDIEFFS 181
            NGAPNKVEEIVQFHVGD +TCL+K SLI GG +C++YGTVMG +GAL A T RED++FFS
Sbjct: 1096 NGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTVMGSVGALLAFTSREDVDFFS 1155

Query: 182  RLEMNMRQEHP 214
             LEM++RQEHP
Sbjct: 1156 HLEMHLRQEHP 1166


>ref|XP_003574320.1| PREDICTED: splicing factor 3B subunit 3-like [Brachypodium
            distachyon]
          Length = 1228

 Score =  117 bits (292), Expect = 1e-24
 Identities = 52/71 (73%), Positives = 62/71 (87%)
 Frame = +2

Query: 2    NGAPNKVEEIVQFHVGDTITCLEKTSLILGGHDCIVYGTVMGCIGALQALTFREDIEFFS 181
            NGAPNKVEEIVQFHVGD +TCL+K SLI GG +C++YGTVMG +GAL A T RED++FFS
Sbjct: 1095 NGAPNKVEEIVQFHVGDVVTCLQKASLIPGGGECLIYGTVMGSVGALLAFTSREDVDFFS 1154

Query: 182  RLEMNMRQEHP 214
             LEM++RQEHP
Sbjct: 1155 HLEMHLRQEHP 1165