BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035131
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containi...    87   2e-15
ref|XP_002523554.1| pentatricopeptide repeat-containing protein,...    72   6e-11
ref|XP_002310672.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002522334.1| pentatricopeptide repeat-containing protein,...    58   7e-07
dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]                           57   1e-06

>ref|XP_002277337.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Vitis vinifera]
          Length = 634

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/62 (64%), Positives = 48/62 (77%)
 Frame = -2

Query: 188 QVNQLLQRCSNSKALKQGKKLHQQIIINGFSSHPFISTKLIQFYADCNDMVSAHALFDKM 9
           Q+N LLQ CSNSKAL QGK+LHQ II+ G   HPF+ TKL+Q YADC D+ SA ALFDK+
Sbjct: 25  QLNHLLQLCSNSKALHQGKQLHQHIILCGLDHHPFMLTKLVQMYADCGDLGSAQALFDKL 84

Query: 8   HE 3
            +
Sbjct: 85  SQ 86


>ref|XP_002523554.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537116|gb|EEF38749.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 611

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/56 (57%), Positives = 42/56 (75%)
 Frame = -2

Query: 176 LLQRCSNSKALKQGKKLHQQIIINGFSSHPFISTKLIQFYADCNDMVSAHALFDKM 9
           +LQ CSN K+L  GK++HQQI ++G+   PF+ TKLIQ YADC+ + SA  LFDKM
Sbjct: 1   MLQLCSNLKSLHAGKQIHQQITVSGWGKDPFMLTKLIQMYADCDHLFSAQRLFDKM 56


>ref|XP_002310672.1| predicted protein [Populus trichocarpa] gi|222853575|gb|EEE91122.1|
           predicted protein [Populus trichocarpa]
          Length = 551

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/57 (50%), Positives = 38/57 (66%)
 Frame = -2

Query: 173 LQRCSNSKALKQGKKLHQQIIINGFSSHPFISTKLIQFYADCNDMVSAHALFDKMHE 3
           LQ C  +KA K G  +H QI+ NGF+S+  +STKLI FY+   D VSA  +FD+M E
Sbjct: 4   LQLCIETKAKKPGHLIHNQILTNGFASNIHLSTKLIIFYSKLGDTVSARKVFDRMPE 60


>ref|XP_002522334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223538412|gb|EEF40018.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 507

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 27/64 (42%), Positives = 40/64 (62%)
 Frame = -2

Query: 194 PCQVNQLLQRCSNSKALKQGKKLHQQIIINGFSSHPFISTKLIQFYADCNDMVSAHALFD 15
           P   + L+Q C  ++AL+ GKK+H  I ++GF     IS +L+  YA CND+V A  LF+
Sbjct: 80  PSIYSSLIQSCLKNRALEVGKKVHDHIKLSGFIPGLVISNRLLDMYAKCNDLVDAQKLFE 139

Query: 14  KMHE 3
           +M E
Sbjct: 140 EMGE 143


>dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
          Length = 563

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 23/58 (39%), Positives = 41/58 (70%)
 Frame = -2

Query: 176 LLQRCSNSKALKQGKKLHQQIIINGFSSHPFISTKLIQFYADCNDMVSAHALFDKMHE 3
           +L+ CS   AL++GK++H QI+ +GFSS P++ + L+ FY+ C ++  A  +FD++ E
Sbjct: 98  VLKACSIIMALEEGKQIHAQILRSGFSSSPYVQSSLVNFYSKCEEITIARKVFDEITE 155