BLASTX nr result

ID: Coptis24_contig00035128 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035128
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochon...    60   2e-07
gb|AAT57674.1| proline oxidase/dehydrogenase 1 [Nicotiana tabacum]     55   8e-06

>ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochondrial [Vitis vinifera]
           gi|298204407|emb|CBI16887.3| unnamed protein product
           [Vitis vinifera]
          Length = 500

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
 Frame = -3

Query: 310 MANR-VSTNLQQNIPSFLKSLNSSPSTYTAVTTPLNLTEELENTIKRKPITTP---TSHK 143
           MANR VS +   N+  F+++L+SSPS+ T V+ PLNL E+ E T    P       +S  
Sbjct: 1   MANRLVSPSKFLNLRCFVRTLHSSPSSITDVS-PLNLAEKPEETTLLSPTFATGATSSTS 59

Query: 142 TLSLDDGEXXXXXXXXXXXXXXXLNLQMASFDPIVDMGTWVMKSRLM 2
           T+ L D +               +NL +A+ +P+VD+G WVMKSR++
Sbjct: 60  TIDLHDVKGLFSSMSTAKLLRSSVNLHLATLEPMVDVGMWVMKSRVL 106


>gb|AAT57674.1| proline oxidase/dehydrogenase 1 [Nicotiana tabacum]
          Length = 499

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 10/113 (8%)
 Frame = -3

Query: 310 MANRV-STNLQQNIPSFLKSLNSSPSTYTAVTTPLNLTEELENTIKRKPI---------T 161
           MAN+V    L +N+   ++ LNS+PS  +AV  PL+ T +   T    P          T
Sbjct: 1   MANKVVCPKLLKNLGFHVRRLNSAPSPLSAVP-PLSFTGDFNATTVTTPNLVDTVPQINT 59

Query: 160 TPTSHKTLSLDDGEXXXXXXXXXXXXXXXLNLQMASFDPIVDMGTWVMKSRLM 2
            P  +  ++ DD +               L LQMA+ DP+VDMG WVM S+LM
Sbjct: 60  VPDKNNIINFDDVKELFYGVPTSKLIRSTLTLQMAAIDPMVDMGMWVMNSKLM 112


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