BLASTX nr result
ID: Coptis24_contig00035128
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035128 (411 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochon... 60 2e-07 gb|AAT57674.1| proline oxidase/dehydrogenase 1 [Nicotiana tabacum] 55 8e-06 >ref|XP_002282769.1| PREDICTED: proline dehydrogenase 2, mitochondrial [Vitis vinifera] gi|298204407|emb|CBI16887.3| unnamed protein product [Vitis vinifera] Length = 500 Score = 59.7 bits (143), Expect = 2e-07 Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 4/107 (3%) Frame = -3 Query: 310 MANR-VSTNLQQNIPSFLKSLNSSPSTYTAVTTPLNLTEELENTIKRKPITTP---TSHK 143 MANR VS + N+ F+++L+SSPS+ T V+ PLNL E+ E T P +S Sbjct: 1 MANRLVSPSKFLNLRCFVRTLHSSPSSITDVS-PLNLAEKPEETTLLSPTFATGATSSTS 59 Query: 142 TLSLDDGEXXXXXXXXXXXXXXXLNLQMASFDPIVDMGTWVMKSRLM 2 T+ L D + +NL +A+ +P+VD+G WVMKSR++ Sbjct: 60 TIDLHDVKGLFSSMSTAKLLRSSVNLHLATLEPMVDVGMWVMKSRVL 106 >gb|AAT57674.1| proline oxidase/dehydrogenase 1 [Nicotiana tabacum] Length = 499 Score = 54.7 bits (130), Expect = 8e-06 Identities = 39/113 (34%), Positives = 55/113 (48%), Gaps = 10/113 (8%) Frame = -3 Query: 310 MANRV-STNLQQNIPSFLKSLNSSPSTYTAVTTPLNLTEELENTIKRKPI---------T 161 MAN+V L +N+ ++ LNS+PS +AV PL+ T + T P T Sbjct: 1 MANKVVCPKLLKNLGFHVRRLNSAPSPLSAVP-PLSFTGDFNATTVTTPNLVDTVPQINT 59 Query: 160 TPTSHKTLSLDDGEXXXXXXXXXXXXXXXLNLQMASFDPIVDMGTWVMKSRLM 2 P + ++ DD + L LQMA+ DP+VDMG WVM S+LM Sbjct: 60 VPDKNNIINFDDVKELFYGVPTSKLIRSTLTLQMAAIDPMVDMGMWVMNSKLM 112