BLASTX nr result

ID: Coptis24_contig00035119 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035119
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533094.1| conserved hypothetical protein [Ricinus comm...    89   6e-29
ref|XP_002299869.1| predicted protein [Populus trichocarpa] gi|2...    89   1e-28
ref|NP_568906.2| uncharacterized protein [Arabidopsis thaliana] ...    89   3e-28
ref|XP_002864632.1| hypothetical protein ARALYDRAFT_496067 [Arab...    89   3e-28
ref|NP_851220.1| uncharacterized protein [Arabidopsis thaliana] ...    89   3e-28

>ref|XP_002533094.1| conserved hypothetical protein [Ricinus communis]
           gi|223527106|gb|EEF29286.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 287

 Score = 89.4 bits (220), Expect(2) = 6e-29
 Identities = 40/46 (86%), Positives = 45/46 (97%)
 Frame = +2

Query: 104 QGPSCIFVGPIETAKKESLEALYRQARDAYYSGKPLIVDDMFDRVE 241
           +GPSCI+VGP+ETA KE+LEALYRQARDAYYSG+PLIVDDMFDRVE
Sbjct: 50  EGPSCIYVGPVETASKETLEALYRQARDAYYSGQPLIVDDMFDRVE 95



 Score = 63.2 bits (152), Expect(2) = 6e-29
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +1

Query: 301 VQLKLRWYGSKSVVKYPRCSLRRQLTYADAE 393
           V+LKLRWYGSKSVVKYPRCS+RRQ TYADAE
Sbjct: 94  VELKLRWYGSKSVVKYPRCSIRRQSTYADAE 124


>ref|XP_002299869.1| predicted protein [Populus trichocarpa] gi|222847127|gb|EEE84674.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score = 88.6 bits (218), Expect(2) = 1e-28
 Identities = 41/50 (82%), Positives = 47/50 (94%)
 Frame = +2

Query: 92  SLADQGPSCIFVGPIETAKKESLEALYRQARDAYYSGKPLIVDDMFDRVE 241
           +L+ +GPSCIFVGPIETA +++LEALY QARDAYYSGKPLIVDDMFDRVE
Sbjct: 53  ALSPEGPSCIFVGPIETASQDTLEALYCQARDAYYSGKPLIVDDMFDRVE 102



 Score = 62.8 bits (151), Expect(2) = 1e-28
 Identities = 28/31 (90%), Positives = 30/31 (96%)
 Frame = +1

Query: 301 VQLKLRWYGSKSVVKYPRCSLRRQLTYADAE 393
           V+LKLRWYGSKSVVKYPRCSLRRQ TY+DAE
Sbjct: 101 VELKLRWYGSKSVVKYPRCSLRRQSTYSDAE 131


>ref|NP_568906.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332009798|gb|AED97181.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 301

 Score = 89.0 bits (219), Expect(2) = 3e-28
 Identities = 39/47 (82%), Positives = 47/47 (100%)
 Frame = +2

Query: 101 DQGPSCIFVGPIETAKKESLEALYRQARDAYYSGKPLIVDDMFDRVE 241
           ++GPSCIFVGPI++A+KE+LEALYRQA+DAYY+GKPLIVDDMFDRVE
Sbjct: 55  EEGPSCIFVGPIDSARKETLEALYRQAKDAYYNGKPLIVDDMFDRVE 101



 Score = 61.2 bits (147), Expect(2) = 3e-28
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 301 VQLKLRWYGSKSVVKYPRCSLRRQLTYADAE 393
           V+LKLRWYGSKSVVKYPRCSL RQ TYADAE
Sbjct: 100 VELKLRWYGSKSVVKYPRCSLLRQSTYADAE 130


>ref|XP_002864632.1| hypothetical protein ARALYDRAFT_496067 [Arabidopsis lyrata subsp.
           lyrata] gi|297310467|gb|EFH40891.1| hypothetical protein
           ARALYDRAFT_496067 [Arabidopsis lyrata subsp. lyrata]
          Length = 299

 Score = 89.0 bits (219), Expect(2) = 3e-28
 Identities = 39/47 (82%), Positives = 47/47 (100%)
 Frame = +2

Query: 101 DQGPSCIFVGPIETAKKESLEALYRQARDAYYSGKPLIVDDMFDRVE 241
           ++GPSCIFVGPI++A+KE+LEALYRQA+DAYY+GKPLIVDDMFDRVE
Sbjct: 55  EEGPSCIFVGPIDSARKETLEALYRQAKDAYYNGKPLIVDDMFDRVE 101



 Score = 61.2 bits (147), Expect(2) = 3e-28
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 301 VQLKLRWYGSKSVVKYPRCSLRRQLTYADAE 393
           V+LKLRWYGSKSVVKYPRCSL RQ TYADAE
Sbjct: 100 VELKLRWYGSKSVVKYPRCSLLRQSTYADAE 130


>ref|NP_851220.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332009797|gb|AED97180.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 299

 Score = 89.0 bits (219), Expect(2) = 3e-28
 Identities = 39/47 (82%), Positives = 47/47 (100%)
 Frame = +2

Query: 101 DQGPSCIFVGPIETAKKESLEALYRQARDAYYSGKPLIVDDMFDRVE 241
           ++GPSCIFVGPI++A+KE+LEALYRQA+DAYY+GKPLIVDDMFDRVE
Sbjct: 55  EEGPSCIFVGPIDSARKETLEALYRQAKDAYYNGKPLIVDDMFDRVE 101



 Score = 61.2 bits (147), Expect(2) = 3e-28
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 301 VQLKLRWYGSKSVVKYPRCSLRRQLTYADAE 393
           V+LKLRWYGSKSVVKYPRCSL RQ TYADAE
Sbjct: 100 VELKLRWYGSKSVVKYPRCSLLRQSTYADAE 130


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