BLASTX nr result
ID: Coptis24_contig00035116
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035116 (327 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002441851.1| hypothetical protein SORBIDRAFT_08g003480 [S... 88 6e-16 ref|XP_002311009.1| predicted protein [Populus trichocarpa] gi|2... 88 8e-16 gb|AFW56074.1| hypothetical protein ZEAMMB73_446071 [Zea mays] 87 1e-15 ref|XP_002269817.1| PREDICTED: ribonuclease H2 subunit A isoform... 86 3e-15 ref|XP_002269852.1| PREDICTED: ribonuclease H2 subunit A isoform... 86 3e-15 >ref|XP_002441851.1| hypothetical protein SORBIDRAFT_08g003480 [Sorghum bicolor] gi|241942544|gb|EES15689.1| hypothetical protein SORBIDRAFT_08g003480 [Sorghum bicolor] Length = 297 Score = 88.2 bits (217), Expect = 6e-16 Identities = 40/67 (59%), Positives = 53/67 (79%) Frame = +2 Query: 2 FKKLVEVFWEADLDEESSSDKNGNRRQLKLSSVGVTGYKRKSEEIESTGKSRCKFFEARK 181 FK VEV WE+D +E +D +RQ+KLSS+G TG+KRK+EEIES+GK RCKFF+ARK Sbjct: 230 FKDAVEVTWESDEVDEDGTDNGSTKRQVKLSSLGFTGFKRKTEEIESSGKGRCKFFQARK 289 Query: 182 LDLLTRF 202 L+L+ +F Sbjct: 290 LELVRKF 296 >ref|XP_002311009.1| predicted protein [Populus trichocarpa] gi|222850829|gb|EEE88376.1| predicted protein [Populus trichocarpa] Length = 297 Score = 87.8 bits (216), Expect = 8e-16 Identities = 43/66 (65%), Positives = 50/66 (75%) Frame = +2 Query: 5 KKLVEVFWEADLDEESSSDKNGNRRQLKLSSVGVTGYKRKSEEIESTGKSRCKFFEARKL 184 K +VEV WE+D EE S + +RQLKLSS GVT KRKSEEIES+GKSRCKFF+ARKL Sbjct: 232 KNMVEVVWESDKTEEDGSSSSSGKRQLKLSSFGVTTSKRKSEEIESSGKSRCKFFQARKL 291 Query: 185 DLLTRF 202 + L F Sbjct: 292 EQLANF 297 >gb|AFW56074.1| hypothetical protein ZEAMMB73_446071 [Zea mays] Length = 297 Score = 87.4 bits (215), Expect = 1e-15 Identities = 39/67 (58%), Positives = 54/67 (80%) Frame = +2 Query: 2 FKKLVEVFWEADLDEESSSDKNGNRRQLKLSSVGVTGYKRKSEEIESTGKSRCKFFEARK 181 FK V+V WE+D +E +D G +RQ+KLSS+G TG+KRK+E+IES+GK RCKFF+ARK Sbjct: 230 FKDAVDVTWESDEVDEEGTDNGGAKRQVKLSSLGFTGFKRKTEDIESSGKGRCKFFQARK 289 Query: 182 LDLLTRF 202 L+L+ +F Sbjct: 290 LELVRKF 296 >ref|XP_002269817.1| PREDICTED: ribonuclease H2 subunit A isoform 1 [Vitis vinifera] gi|296086584|emb|CBI32219.3| unnamed protein product [Vitis vinifera] Length = 297 Score = 85.9 bits (211), Expect = 3e-15 Identities = 43/66 (65%), Positives = 49/66 (74%) Frame = +2 Query: 5 KKLVEVFWEADLDEESSSDKNGNRRQLKLSSVGVTGYKRKSEEIESTGKSRCKFFEARKL 184 K +VEV WEAD EE S +RQLKLSSVG KRKSEEIES+GK RCKFF+ARKL Sbjct: 232 KDIVEVLWEADKVEEDGSTNRNGKRQLKLSSVGFIESKRKSEEIESSGKGRCKFFQARKL 291 Query: 185 DLLTRF 202 + LT+F Sbjct: 292 EQLTQF 297 >ref|XP_002269852.1| PREDICTED: ribonuclease H2 subunit A isoform 2 [Vitis vinifera] Length = 278 Score = 85.9 bits (211), Expect = 3e-15 Identities = 43/66 (65%), Positives = 49/66 (74%) Frame = +2 Query: 5 KKLVEVFWEADLDEESSSDKNGNRRQLKLSSVGVTGYKRKSEEIESTGKSRCKFFEARKL 184 K +VEV WEAD EE S +RQLKLSSVG KRKSEEIES+GK RCKFF+ARKL Sbjct: 213 KDIVEVLWEADKVEEDGSTNRNGKRQLKLSSVGFIESKRKSEEIESSGKGRCKFFQARKL 272 Query: 185 DLLTRF 202 + LT+F Sbjct: 273 EQLTQF 278