BLASTX nr result

ID: Coptis24_contig00035108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035108
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265...   235   2e-60
ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...   232   3e-59
ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802...   231   4e-59
ref|XP_002518800.1| conserved hypothetical protein [Ricinus comm...   231   5e-59
ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243...   229   1e-58

>ref|XP_003631315.1| PREDICTED: uncharacterized protein LOC100265010 [Vitis vinifera]
          Length = 2792

 Score =  235 bits (600), Expect = 2e-60
 Identities = 116/157 (73%), Positives = 138/157 (87%), Gaps = 1/157 (0%)
 Frame = -3

Query: 468  FPFSVDVLSPETSLIYGESPVLLESGNDENALVTIFGNSGGISCGDIIGFGAEQVILVRD 289
            FP S+DVLSPETS IYGE+PVLLE G DENA++T+FGNS  I  G ++GFGAEQVILVRD
Sbjct: 1484 FPQSIDVLSPETSEIYGEAPVLLEPGKDENAIITMFGNSQNIG-GSMVGFGAEQVILVRD 1542

Query: 288  DSARKEIASHVGKQALVLTVLECKGLEFQDVLLYNFFGTSPLKNQWRVVYQYM-EQCIPD 112
            D +RKEI+ +VG+QALVLT+LECKGLEFQDVLLYNFFG+SPLKNQWRVVY+YM EQ + D
Sbjct: 1543 DCSRKEISDYVGEQALVLTILECKGLEFQDVLLYNFFGSSPLKNQWRVVYEYMKEQNLLD 1602

Query: 111  CSGCISFPSFNEAKHSILCSELKQLYVAITRTRQRLW 1
             +   S+PSF++ KH+++CSELKQLYVAITRTRQRLW
Sbjct: 1603 STAPRSYPSFSQEKHNVMCSELKQLYVAITRTRQRLW 1639


>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
            predicted protein [Populus trichocarpa]
          Length = 1950

 Score =  232 bits (591), Expect = 3e-59
 Identities = 118/157 (75%), Positives = 138/157 (87%), Gaps = 1/157 (0%)
 Frame = -3

Query: 468  FPFSVDVLSPETSLIYGESPVLLESGNDENALVTIFGNSGGISCGDIIGFGAEQVILVRD 289
            FP  +DVLS ETSLIYGE+P+LLESGNDENA+VTIFGNSG +   + +GFGAEQVILVRD
Sbjct: 1339 FPSFIDVLSHETSLIYGEAPILLESGNDENAIVTIFGNSGNVR-SNFVGFGAEQVILVRD 1397

Query: 288  DSARKEIASHVGKQALVLTVLECKGLEFQDVLLYNFFGTSPLKNQWRVVYQYM-EQCIPD 112
            D+A+KEI ++VGK ALVLTV+ECKGLEFQDVLLYNFFG+SPLKN+WRVVY++M EQ + D
Sbjct: 1398 DAAKKEIDNYVGKHALVLTVVECKGLEFQDVLLYNFFGSSPLKNKWRVVYEFMKEQDLLD 1457

Query: 111  CSGCISFPSFNEAKHSILCSELKQLYVAITRTRQRLW 1
             +   SFPSF  AKH++LCSELKQLYVAITRTRQRLW
Sbjct: 1458 ANS-PSFPSFIPAKHNVLCSELKQLYVAITRTRQRLW 1493


>ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802419 [Glycine max]
          Length = 2812

 Score =  231 bits (590), Expect = 4e-59
 Identities = 114/157 (72%), Positives = 139/157 (88%), Gaps = 1/157 (0%)
 Frame = -3

Query: 468  FPFSVDVLSPETSLIYGESPVLLESGNDENALVTIFGNSGGISCGDIIGFGAEQVILVRD 289
            FP S+DVL PETSLIYGE PV+LE G+ +NA+VTIFGNSG ++ G I+GFGAEQVILVRD
Sbjct: 1497 FPHSIDVLKPETSLIYGEGPVVLECGSRKNAIVTIFGNSGHVA-GKIVGFGAEQVILVRD 1555

Query: 288  DSARKEIASHVGKQALVLTVLECKGLEFQDVLLYNFFGTSPLKNQWRVVYQYM-EQCIPD 112
            DSARKE+  +V KQALVLT+LECKGLEFQDVLLYNFFG+SPLKN+WRV+Y+YM EQ + +
Sbjct: 1556 DSARKEVLDYVEKQALVLTILECKGLEFQDVLLYNFFGSSPLKNRWRVIYEYMKEQEMLE 1615

Query: 111  CSGCISFPSFNEAKHSILCSELKQLYVAITRTRQRLW 1
             +   S+P+F+++KH++LCSELKQLYVAITRTRQRLW
Sbjct: 1616 PTELKSYPNFSDSKHNLLCSELKQLYVAITRTRQRLW 1652


>ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
            gi|223542181|gb|EEF43725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2820

 Score =  231 bits (589), Expect = 5e-59
 Identities = 116/158 (73%), Positives = 138/158 (87%), Gaps = 2/158 (1%)
 Frame = -3

Query: 468  FPFSVDVLSPETSLIYGESPVLLESGND-ENALVTIFGNSGGISCGDIIGFGAEQVILVR 292
            FP  VD+L+ ETS I+GE+P+LLESG+D ENA+VTIFGN+G I  G  +GFGAEQVILVR
Sbjct: 1511 FPTFVDILNHETSQIFGEAPILLESGDDDENAIVTIFGNNGNIG-GSFVGFGAEQVILVR 1569

Query: 291  DDSARKEIASHVGKQALVLTVLECKGLEFQDVLLYNFFGTSPLKNQWRVVYQYM-EQCIP 115
            DDSARKEI  +VGKQALVLT++ECKGLEFQDVLLYNFFG+SPL+N+WRV+Y+YM EQ + 
Sbjct: 1570 DDSARKEICKYVGKQALVLTIVECKGLEFQDVLLYNFFGSSPLRNKWRVLYEYMKEQNLL 1629

Query: 114  DCSGCISFPSFNEAKHSILCSELKQLYVAITRTRQRLW 1
            D S   SFP+FN A+H++LCSELKQLYVAITRTRQRLW
Sbjct: 1630 DASSPQSFPTFNPARHNVLCSELKQLYVAITRTRQRLW 1667


>ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
          Length = 2788

 Score =  229 bits (585), Expect = 1e-58
 Identities = 115/157 (73%), Positives = 136/157 (86%), Gaps = 1/157 (0%)
 Frame = -3

Query: 468  FPFSVDVLSPETSLIYGESPVLLESGNDENALVTIFGNSGGISCGDIIGFGAEQVILVRD 289
            FP SVD+LSPETSLIYGE+PVLL+ G DENA++T+FGNS  +  G+  GFGAEQVILVRD
Sbjct: 1502 FPQSVDILSPETSLIYGEAPVLLKPGKDENAIITMFGNSQNVG-GNRFGFGAEQVILVRD 1560

Query: 288  DSARKEIASHVGKQALVLTVLECKGLEFQDVLLYNFFGTSPLKNQWRVVYQYM-EQCIPD 112
            D ARKEI+ ++GKQALVLT+LECKGLEFQDVLLYNFFG+SPLKN WRV+Y+YM EQ + D
Sbjct: 1561 DCARKEISGYIGKQALVLTILECKGLEFQDVLLYNFFGSSPLKNHWRVIYEYMKEQDLLD 1620

Query: 111  CSGCISFPSFNEAKHSILCSELKQLYVAITRTRQRLW 1
             +     PSF++AKH++LCSELKQLYVAITRTRQRLW
Sbjct: 1621 STA--PSPSFSQAKHNLLCSELKQLYVAITRTRQRLW 1655


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