BLASTX nr result

ID: Coptis24_contig00035099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035099
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_567510.1| hypoxia up-regulated 1 [Arabidopsis thaliana] g...    64   1e-08
dbj|BAF01805.1| HSP like protein [Arabidopsis thaliana]                64   1e-08
gb|AAK93685.1| putative HSP protein [Arabidopsis thaliana]             64   1e-08
emb|CAB10440.1| growth regulator like protein [Arabidopsis thali...    64   1e-08
ref|XP_002870140.1| hypothetical protein ARALYDRAFT_493210 [Arab...    62   6e-08

>ref|NP_567510.1| hypoxia up-regulated 1 [Arabidopsis thaliana]
           gi|378548353|sp|F4JMJ1.1|HSP7R_ARATH RecName: Full=Heat
           shock 70 kDa protein 17; AltName: Full=Heat shock
           protein 70-17; Short=AtHsp70-17; Flags: Precursor
           gi|332658381|gb|AEE83781.1| hypoxia up-regulated 1
           [Arabidopsis thaliana]
          Length = 867

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/68 (57%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
 Frame = -3

Query: 467 RWNLKHEGQDIEMGLVEHFADEFNC*VGFRVDVRKFSKVMAILKKQ-------LWSNAMA 309
           RW+L   GQ +EM LVEHFADEFN  +G  VDVRKF K MA LKKQ       L +N  A
Sbjct: 259 RWDLGLGGQSMEMRLVEHFADEFNKQLGNGVDVRKFPKAMAKLKKQVKRTKEILSANTAA 318

Query: 308 PISQV*LH 285
           PIS   LH
Sbjct: 319 PISVESLH 326


>dbj|BAF01805.1| HSP like protein [Arabidopsis thaliana]
          Length = 701

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/68 (57%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
 Frame = -3

Query: 467 RWNLKHEGQDIEMGLVEHFADEFNC*VGFRVDVRKFSKVMAILKKQ-------LWSNAMA 309
           RW+L   GQ +EM LVEHFADEFN  +G  VDVRKF K MA LKKQ       L +N  A
Sbjct: 93  RWDLGLGGQSMEMRLVEHFADEFNKQLGNGVDVRKFPKAMAKLKKQVKRTKEILSANTAA 152

Query: 308 PISQV*LH 285
           PIS   LH
Sbjct: 153 PISVESLH 160


>gb|AAK93685.1| putative HSP protein [Arabidopsis thaliana]
          Length = 867

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/68 (57%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
 Frame = -3

Query: 467 RWNLKHEGQDIEMGLVEHFADEFNC*VGFRVDVRKFSKVMAILKKQ-------LWSNAMA 309
           RW+L   GQ +EM LVEHFADEFN  +G  VDVRKF K MA LKKQ       L +N  A
Sbjct: 259 RWDLGLGGQSMEMRLVEHFADEFNKQLGNGVDVRKFPKAMAKLKKQVKRTKEILSANTAA 318

Query: 308 PISQV*LH 285
           PIS   LH
Sbjct: 319 PISVESLH 326


>emb|CAB10440.1| growth regulator like protein [Arabidopsis thaliana]
           gi|7268415|emb|CAB78707.1| growth regulator like protein
           [Arabidopsis thaliana]
          Length = 912

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 39/68 (57%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
 Frame = -3

Query: 467 RWNLKHEGQDIEMGLVEHFADEFNC*VGFRVDVRKFSKVMAILKKQ-------LWSNAMA 309
           RW+L   GQ +EM LVEHFADEFN  +G  VDVRKF K MA LKKQ       L +N  A
Sbjct: 687 RWDLGLGGQSMEMRLVEHFADEFNKQLGNGVDVRKFPKAMAKLKKQVKRTKEILSANTAA 746

Query: 308 PISQV*LH 285
           PIS   LH
Sbjct: 747 PISVESLH 754


>ref|XP_002870140.1| hypothetical protein ARALYDRAFT_493210 [Arabidopsis lyrata subsp.
           lyrata] gi|297315976|gb|EFH46399.1| hypothetical protein
           ARALYDRAFT_493210 [Arabidopsis lyrata subsp. lyrata]
          Length = 884

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 38/68 (55%), Positives = 42/68 (61%), Gaps = 7/68 (10%)
 Frame = -3

Query: 467 RWNLKHEGQDIEMGLVEHFADEFNC*VGFRVDVRKFSKVMAILKKQ-------LWSNAMA 309
           RW+    GQ +EM LVEHFADEFN  +G  VDVRKF K MA LKKQ       L +N  A
Sbjct: 259 RWDSGLGGQSMEMRLVEHFADEFNKQLGNGVDVRKFPKAMAKLKKQVKRTKEILSANTAA 318

Query: 308 PISQV*LH 285
           PIS   LH
Sbjct: 319 PISVESLH 326


Top