BLASTX nr result
ID: Coptis24_contig00035099
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035099 (472 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_567510.1| hypoxia up-regulated 1 [Arabidopsis thaliana] g... 64 1e-08 dbj|BAF01805.1| HSP like protein [Arabidopsis thaliana] 64 1e-08 gb|AAK93685.1| putative HSP protein [Arabidopsis thaliana] 64 1e-08 emb|CAB10440.1| growth regulator like protein [Arabidopsis thali... 64 1e-08 ref|XP_002870140.1| hypothetical protein ARALYDRAFT_493210 [Arab... 62 6e-08 >ref|NP_567510.1| hypoxia up-regulated 1 [Arabidopsis thaliana] gi|378548353|sp|F4JMJ1.1|HSP7R_ARATH RecName: Full=Heat shock 70 kDa protein 17; AltName: Full=Heat shock protein 70-17; Short=AtHsp70-17; Flags: Precursor gi|332658381|gb|AEE83781.1| hypoxia up-regulated 1 [Arabidopsis thaliana] Length = 867 Score = 63.9 bits (154), Expect = 1e-08 Identities = 39/68 (57%), Positives = 43/68 (63%), Gaps = 7/68 (10%) Frame = -3 Query: 467 RWNLKHEGQDIEMGLVEHFADEFNC*VGFRVDVRKFSKVMAILKKQ-------LWSNAMA 309 RW+L GQ +EM LVEHFADEFN +G VDVRKF K MA LKKQ L +N A Sbjct: 259 RWDLGLGGQSMEMRLVEHFADEFNKQLGNGVDVRKFPKAMAKLKKQVKRTKEILSANTAA 318 Query: 308 PISQV*LH 285 PIS LH Sbjct: 319 PISVESLH 326 >dbj|BAF01805.1| HSP like protein [Arabidopsis thaliana] Length = 701 Score = 63.9 bits (154), Expect = 1e-08 Identities = 39/68 (57%), Positives = 43/68 (63%), Gaps = 7/68 (10%) Frame = -3 Query: 467 RWNLKHEGQDIEMGLVEHFADEFNC*VGFRVDVRKFSKVMAILKKQ-------LWSNAMA 309 RW+L GQ +EM LVEHFADEFN +G VDVRKF K MA LKKQ L +N A Sbjct: 93 RWDLGLGGQSMEMRLVEHFADEFNKQLGNGVDVRKFPKAMAKLKKQVKRTKEILSANTAA 152 Query: 308 PISQV*LH 285 PIS LH Sbjct: 153 PISVESLH 160 >gb|AAK93685.1| putative HSP protein [Arabidopsis thaliana] Length = 867 Score = 63.9 bits (154), Expect = 1e-08 Identities = 39/68 (57%), Positives = 43/68 (63%), Gaps = 7/68 (10%) Frame = -3 Query: 467 RWNLKHEGQDIEMGLVEHFADEFNC*VGFRVDVRKFSKVMAILKKQ-------LWSNAMA 309 RW+L GQ +EM LVEHFADEFN +G VDVRKF K MA LKKQ L +N A Sbjct: 259 RWDLGLGGQSMEMRLVEHFADEFNKQLGNGVDVRKFPKAMAKLKKQVKRTKEILSANTAA 318 Query: 308 PISQV*LH 285 PIS LH Sbjct: 319 PISVESLH 326 >emb|CAB10440.1| growth regulator like protein [Arabidopsis thaliana] gi|7268415|emb|CAB78707.1| growth regulator like protein [Arabidopsis thaliana] Length = 912 Score = 63.9 bits (154), Expect = 1e-08 Identities = 39/68 (57%), Positives = 43/68 (63%), Gaps = 7/68 (10%) Frame = -3 Query: 467 RWNLKHEGQDIEMGLVEHFADEFNC*VGFRVDVRKFSKVMAILKKQ-------LWSNAMA 309 RW+L GQ +EM LVEHFADEFN +G VDVRKF K MA LKKQ L +N A Sbjct: 687 RWDLGLGGQSMEMRLVEHFADEFNKQLGNGVDVRKFPKAMAKLKKQVKRTKEILSANTAA 746 Query: 308 PISQV*LH 285 PIS LH Sbjct: 747 PISVESLH 754 >ref|XP_002870140.1| hypothetical protein ARALYDRAFT_493210 [Arabidopsis lyrata subsp. lyrata] gi|297315976|gb|EFH46399.1| hypothetical protein ARALYDRAFT_493210 [Arabidopsis lyrata subsp. lyrata] Length = 884 Score = 61.6 bits (148), Expect = 6e-08 Identities = 38/68 (55%), Positives = 42/68 (61%), Gaps = 7/68 (10%) Frame = -3 Query: 467 RWNLKHEGQDIEMGLVEHFADEFNC*VGFRVDVRKFSKVMAILKKQ-------LWSNAMA 309 RW+ GQ +EM LVEHFADEFN +G VDVRKF K MA LKKQ L +N A Sbjct: 259 RWDSGLGGQSMEMRLVEHFADEFNKQLGNGVDVRKFPKAMAKLKKQVKRTKEILSANTAA 318 Query: 308 PISQV*LH 285 PIS LH Sbjct: 319 PISVESLH 326