BLASTX nr result

ID: Coptis24_contig00035091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035091
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28689.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002277881.1| PREDICTED: patatin group A-3 [Vitis vinifera]     136   2e-30
emb|CAN67759.1| hypothetical protein VITISV_002575 [Vitis vinifera]   136   2e-30
ref|XP_002876713.1| hypothetical protein ARALYDRAFT_907903 [Arab...   131   5e-29
ref|XP_004158915.1| PREDICTED: LOW QUALITY PROTEIN: patatin grou...   127   9e-28

>emb|CBI28689.3| unnamed protein product [Vitis vinifera]
          Length = 363

 Score =  136 bits (342), Expect = 2e-30
 Identities = 70/93 (75%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
 Frame = -2

Query: 278 HNKRDFPSVNGVEDLLVLSLGNGSLTCSSPMKLSRNGDCSTPSVVNIALDGVSETVDQML 99
           HNKRDFPSVNGVEDLLVLSLGNGSLT  S  +L R+G+CST +VV+I LDGVSETVDQML
Sbjct: 215 HNKRDFPSVNGVEDLLVLSLGNGSLTDPSRWRLRRDGECSTSAVVDIVLDGVSETVDQML 274

Query: 98  GNAFSWNRTDYVRIQANGF-VKKNVEASVEQVL 3
           GNAF WNRTDYVRIQANGF ++K      E+VL
Sbjct: 275 GNAFCWNRTDYVRIQANGFGIQKVGPRMAEEVL 307


>ref|XP_002277881.1| PREDICTED: patatin group A-3 [Vitis vinifera]
          Length = 385

 Score =  136 bits (342), Expect = 2e-30
 Identities = 70/93 (75%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
 Frame = -2

Query: 278 HNKRDFPSVNGVEDLLVLSLGNGSLTCSSPMKLSRNGDCSTPSVVNIALDGVSETVDQML 99
           HNKRDFPSVNGVEDLLVLSLGNGSLT  S  +L R+G+CST +VV+I LDGVSETVDQML
Sbjct: 237 HNKRDFPSVNGVEDLLVLSLGNGSLTDPSRWRLRRDGECSTSAVVDIVLDGVSETVDQML 296

Query: 98  GNAFSWNRTDYVRIQANGF-VKKNVEASVEQVL 3
           GNAF WNRTDYVRIQANGF ++K      E+VL
Sbjct: 297 GNAFCWNRTDYVRIQANGFGIQKVGPRMAEEVL 329


>emb|CAN67759.1| hypothetical protein VITISV_002575 [Vitis vinifera]
          Length = 385

 Score =  136 bits (342), Expect = 2e-30
 Identities = 70/93 (75%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
 Frame = -2

Query: 278 HNKRDFPSVNGVEDLLVLSLGNGSLTCSSPMKLSRNGDCSTPSVVNIALDGVSETVDQML 99
           HNKRDFPSVNGVEDLLVLSLGNGSLT  S  +L R+G+CST +VV+I LDGVSETVDQML
Sbjct: 237 HNKRDFPSVNGVEDLLVLSLGNGSLTDPSRWRLRRDGECSTSAVVDIVLDGVSETVDQML 296

Query: 98  GNAFSWNRTDYVRIQANGF-VKKNVEASVEQVL 3
           GNAF WNRTDYVRIQANGF ++K      E+VL
Sbjct: 297 GNAFCWNRTDYVRIQANGFGIQKVGPRMAEEVL 329


>ref|XP_002876713.1| hypothetical protein ARALYDRAFT_907903 [Arabidopsis lyrata subsp.
           lyrata] gi|297322551|gb|EFH52972.1| hypothetical protein
           ARALYDRAFT_907903 [Arabidopsis lyrata subsp. lyrata]
          Length = 384

 Score =  131 bits (330), Expect = 5e-29
 Identities = 67/92 (72%), Positives = 73/92 (79%), Gaps = 2/92 (2%)
 Frame = -2

Query: 278 HNKRDFPSVNGVEDLLVLSLGNGSLTCSSP--MKLSRNGDCSTPSVVNIALDGVSETVDQ 105
           HNKRDFPSVNGV+DLLVLSLGNGS T SS    KL RNGDCST  VV+I LDGVS+TVDQ
Sbjct: 239 HNKRDFPSVNGVDDLLVLSLGNGSSTMSSSPGRKLRRNGDCSTSCVVDIVLDGVSDTVDQ 298

Query: 104 MLGNAFSWNRTDYVRIQANGFVKKNVEASVEQ 9
           MLGNAF WNRTDYVRIQANG      E  +++
Sbjct: 299 MLGNAFCWNRTDYVRIQANGLTSGGAEELLKE 330


>ref|XP_004158915.1| PREDICTED: LOW QUALITY PROTEIN: patatin group A-3-like [Cucumis
           sativus]
          Length = 374

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/90 (72%), Positives = 73/90 (81%)
 Frame = -2

Query: 278 HNKRDFPSVNGVEDLLVLSLGNGSLTCSSPMKLSRNGDCSTPSVVNIALDGVSETVDQML 99
           HNKRDFPSVNGVEDLLVLSLGNGS +  +  K+ RNG+CST  VV I LDGVS+TVDQML
Sbjct: 233 HNKRDFPSVNGVEDLLVLSLGNGSASGGNG-KVRRNGECSTSVVVGIVLDGVSDTVDQML 291

Query: 98  GNAFSWNRTDYVRIQANGFVKKNVEASVEQ 9
           GNAF WNRTDYVRIQANG V++  E   E+
Sbjct: 292 GNAFCWNRTDYVRIQANGLVEEEGEVLKER 321


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