BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035085
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612377.1| Selenium binding protein-like protein [Medic...    94   1e-17
ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat...    93   3e-17
ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat...    87   1e-15
ref|XP_002884496.1| pentatricopeptide repeat-containing protein ...    87   1e-15
emb|CBI36755.3| unnamed protein product [Vitis vinifera]               87   1e-15

>ref|XP_003612377.1| Selenium binding protein-like protein [Medicago truncatula]
           gi|355513712|gb|AES95335.1| Selenium binding
           protein-like protein [Medicago truncatula]
          Length = 611

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 40/80 (50%), Positives = 59/80 (73%)
 Frame = -3

Query: 333 AVWGALLNGCEIHDNVDLAEKVENHIMELKPRDGGVYVLLANIYAKAGRWEGVKRFRDLI 154
           A+WGALLNGC+IH+N+ +A +V+  + EL+P   G+Y LL+NIYA +G+WE V R R ++
Sbjct: 488 AIWGALLNGCQIHENIPVASQVKVRLAELEPIQSGIYALLSNIYANSGKWEEVNRTRKMM 547

Query: 153 RRKKCGRTYGSSSIERKVFS 94
           + K+  +T G SS+E KV S
Sbjct: 548 KHKRIAKTIGHSSVEMKVSS 567


>ref|XP_003520814.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240-like [Glycine max]
          Length = 563

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 42/80 (52%), Positives = 60/80 (75%)
 Frame = -3

Query: 333 AVWGALLNGCEIHDNVDLAEKVENHIMELKPRDGGVYVLLANIYAKAGRWEGVKRFRDLI 154
           A+WGALLNGC+IH+NV +A +V+  + EL+P   GV++LL+NIYAKAGRWE V   R ++
Sbjct: 484 AIWGALLNGCQIHENVCVANQVKVRLKELEPCQSGVHILLSNIYAKAGRWEEVNVTRKVM 543

Query: 153 RRKKCGRTYGSSSIERKVFS 94
           + K+  +T G SS+E K+ S
Sbjct: 544 KHKRITKTIGHSSVEMKLLS 563


>ref|XP_002284834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240 [Vitis vinifera]
          Length = 565

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/80 (48%), Positives = 58/80 (72%)
 Frame = -3

Query: 333 AVWGALLNGCEIHDNVDLAEKVENHIMELKPRDGGVYVLLANIYAKAGRWEGVKRFRDLI 154
           A+W ALLNGC+I+ N+D+A++V   + EL+    GVYVLL+NIYA A RWE VK  R+L+
Sbjct: 485 AIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMARELM 544

Query: 153 RRKKCGRTYGSSSIERKVFS 94
           + +K  ++ G SS+E K+ +
Sbjct: 545 KERKIQKSLGHSSVEMKMLA 564


>ref|XP_002884496.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330336|gb|EFH60755.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 547

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 37/74 (50%), Positives = 54/74 (72%)
 Frame = -3

Query: 330 VWGALLNGCEIHDNVDLAEKVENHIMELKPRDGGVYVLLANIYAKAGRWEGVKRFRDLIR 151
           +WGALLNGCEIH+N+DLA+++ + + E +    G+YVLL+NIYAKAGRW  VK  R+ ++
Sbjct: 471 IWGALLNGCEIHENLDLADRIRSMVSESEELGSGIYVLLSNIYAKAGRWADVKLIRESMK 530

Query: 150 RKKCGRTYGSSSIE 109
            K+  +    SS+E
Sbjct: 531 SKRVDKLLAHSSVE 544


>emb|CBI36755.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 39/78 (50%), Positives = 57/78 (73%)
 Frame = -3

Query: 333 AVWGALLNGCEIHDNVDLAEKVENHIMELKPRDGGVYVLLANIYAKAGRWEGVKRFRDLI 154
           A+W ALLNGC+I+ N+D+A++V   + EL+    GVYVLL+NIYA A RWE VK  R+L+
Sbjct: 459 AIWSALLNGCKIYQNIDVADRVRRRVRELEVDGSGVYVLLSNIYAGACRWEEVKMARELM 518

Query: 153 RRKKCGRTYGSSSIERKV 100
           + +K  ++ G SS+E K+
Sbjct: 519 KERKIQKSLGHSSVEMKM 536