BLASTX nr result

ID: Coptis24_contig00035074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035074
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM82032.1| small GTP-binding protein of Rab family, Rab6 [C...    69   3e-10
ref|XP_002302484.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_003517384.1| PREDICTED: ras-related protein RABH1b-like [...    68   9e-10
emb|CBI16724.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_002526504.1| protein with unknown function [Ricinus commu...    68   9e-10

>dbj|BAM82032.1| small GTP-binding protein of Rab family, Rab6 [Cyanidioschyzon
           merolae strain 10D]
          Length = 211

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 31/44 (70%), Positives = 38/44 (86%)
 Frame = -1

Query: 369 KWIEEVRQDGGNDVIIALIGNKTDPEDRRQVSTEEGEAKAQDLD 238
           KWIEEVR + GN+VII L+GNK+D  D+RQVS EEGEAKA++LD
Sbjct: 107 KWIEEVRNERGNEVIIVLVGNKSDQNDKRQVSVEEGEAKAKELD 150


>ref|XP_002302484.1| predicted protein [Populus trichocarpa] gi|222844210|gb|EEE81757.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = -1

Query: 369 KWIEEVRQDGGNDVIIALIGNKTDPEDRRQVSTEEGEAKAQDLD 238
           KWIEEVR + G+DVII L+GNKTD  D+RQVS EEGEAKA+DL+
Sbjct: 102 KWIEEVRSERGSDVIIVLVGNKTDLVDKRQVSIEEGEAKARDLN 145


>ref|XP_003517384.1| PREDICTED: ras-related protein RABH1b-like [Glycine max]
          Length = 206

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/44 (70%), Positives = 39/44 (88%)
 Frame = -1

Query: 369 KWIEEVRQDGGNDVIIALIGNKTDPEDRRQVSTEEGEAKAQDLD 238
           KWIEEVR + G+DVII L+GNKTD  D+RQVSTEEGEAK+++L+
Sbjct: 102 KWIEEVRSERGSDVIIVLVGNKTDLVDKRQVSTEEGEAKSRELN 145


>emb|CBI16724.3| unnamed protein product [Vitis vinifera]
          Length = 179

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = -1

Query: 369 KWIEEVRQDGGNDVIIALIGNKTDPEDRRQVSTEEGEAKAQDLD 238
           KWIEEVR + G+DVII L+GNKTD  D+RQVS EEGEAKA+DL+
Sbjct: 73  KWIEEVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGEAKARDLN 116


>ref|XP_002526504.1| protein with unknown function [Ricinus communis]
           gi|223534179|gb|EEF35895.1| protein with unknown
           function [Ricinus communis]
          Length = 208

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = -1

Query: 369 KWIEEVRQDGGNDVIIALIGNKTDPEDRRQVSTEEGEAKAQDLD 238
           KWIEEVR + G+DVII L+GNKTD  D+RQVS EEGEAKA+DL+
Sbjct: 102 KWIEEVRTERGSDVIIVLVGNKTDLVDKRQVSIEEGEAKARDLN 145


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