BLASTX nr result
ID: Coptis24_contig00035049
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035049 (209 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo... 43 6e-07 emb|CBI17106.3| unnamed protein product [Vitis vinifera] 43 6e-07 ref|XP_002298162.1| argonaute protein group [Populus trichocarpa... 44 8e-07 ref|XP_002464076.1| hypothetical protein SORBIDRAFT_01g011880 [S... 41 6e-06 >ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis vinifera] Length = 1038 Score = 42.7 bits (99), Expect(2) = 6e-07 Identities = 17/27 (62%), Positives = 23/27 (85%) Frame = -2 Query: 181 RKDTTRLFPADHNNQNLTDRSGNILPG 101 ++ TR FP+DH +++LTDRSGNILPG Sbjct: 888 KRHHTRFFPSDHRSRDLTDRSGNILPG 914 Score = 35.4 bits (80), Expect(2) = 6e-07 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = -1 Query: 209 LPPVTFVVVQKRYHTSF 159 LPPVTFVVVQKR+HT F Sbjct: 878 LPPVTFVVVQKRHHTRF 894 >emb|CBI17106.3| unnamed protein product [Vitis vinifera] Length = 1032 Score = 42.7 bits (99), Expect(2) = 6e-07 Identities = 17/27 (62%), Positives = 23/27 (85%) Frame = -2 Query: 181 RKDTTRLFPADHNNQNLTDRSGNILPG 101 ++ TR FP+DH +++LTDRSGNILPG Sbjct: 882 KRHHTRFFPSDHRSRDLTDRSGNILPG 908 Score = 35.4 bits (80), Expect(2) = 6e-07 Identities = 15/17 (88%), Positives = 16/17 (94%) Frame = -1 Query: 209 LPPVTFVVVQKRYHTSF 159 LPPVTFVVVQKR+HT F Sbjct: 872 LPPVTFVVVQKRHHTRF 888 >ref|XP_002298162.1| argonaute protein group [Populus trichocarpa] gi|222845420|gb|EEE82967.1| argonaute protein group [Populus trichocarpa] Length = 904 Score = 43.9 bits (102), Expect(2) = 8e-07 Identities = 18/27 (66%), Positives = 23/27 (85%) Frame = -2 Query: 181 RKDTTRLFPADHNNQNLTDRSGNILPG 101 ++ TR FPADH+ ++LTDRSGNILPG Sbjct: 758 KRHHTRFFPADHSKRDLTDRSGNILPG 784 Score = 33.9 bits (76), Expect(2) = 8e-07 Identities = 14/16 (87%), Positives = 15/16 (93%) Frame = -1 Query: 206 PPVTFVVVQKRYHTSF 159 PPVTFVVVQKR+HT F Sbjct: 749 PPVTFVVVQKRHHTRF 764 >ref|XP_002464076.1| hypothetical protein SORBIDRAFT_01g011880 [Sorghum bicolor] gi|241917930|gb|EER91074.1| hypothetical protein SORBIDRAFT_01g011880 [Sorghum bicolor] Length = 1087 Score = 41.2 bits (95), Expect(2) = 6e-06 Identities = 18/27 (66%), Positives = 20/27 (74%) Frame = -2 Query: 181 RKDTTRLFPADHNNQNLTDRSGNILPG 101 ++ TRLFP DH Q TDRSGNILPG Sbjct: 936 KRHHTRLFPEDHRAQGQTDRSGNILPG 962 Score = 33.5 bits (75), Expect(2) = 6e-06 Identities = 14/15 (93%), Positives = 15/15 (100%) Frame = -1 Query: 209 LPPVTFVVVQKRYHT 165 LPPVTFVVVQKR+HT Sbjct: 926 LPPVTFVVVQKRHHT 940