BLASTX nr result

ID: Coptis24_contig00035049 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035049
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argo...    43   6e-07
emb|CBI17106.3| unnamed protein product [Vitis vinifera]               43   6e-07
ref|XP_002298162.1| argonaute protein group [Populus trichocarpa...    44   8e-07
ref|XP_002464076.1| hypothetical protein SORBIDRAFT_01g011880 [S...    41   6e-06

>ref|XP_002271699.2| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 5-like [Vitis
           vinifera]
          Length = 1038

 Score = 42.7 bits (99), Expect(2) = 6e-07
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -2

Query: 181 RKDTTRLFPADHNNQNLTDRSGNILPG 101
           ++  TR FP+DH +++LTDRSGNILPG
Sbjct: 888 KRHHTRFFPSDHRSRDLTDRSGNILPG 914



 Score = 35.4 bits (80), Expect(2) = 6e-07
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -1

Query: 209 LPPVTFVVVQKRYHTSF 159
           LPPVTFVVVQKR+HT F
Sbjct: 878 LPPVTFVVVQKRHHTRF 894


>emb|CBI17106.3| unnamed protein product [Vitis vinifera]
          Length = 1032

 Score = 42.7 bits (99), Expect(2) = 6e-07
 Identities = 17/27 (62%), Positives = 23/27 (85%)
 Frame = -2

Query: 181 RKDTTRLFPADHNNQNLTDRSGNILPG 101
           ++  TR FP+DH +++LTDRSGNILPG
Sbjct: 882 KRHHTRFFPSDHRSRDLTDRSGNILPG 908



 Score = 35.4 bits (80), Expect(2) = 6e-07
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -1

Query: 209 LPPVTFVVVQKRYHTSF 159
           LPPVTFVVVQKR+HT F
Sbjct: 872 LPPVTFVVVQKRHHTRF 888


>ref|XP_002298162.1| argonaute protein group [Populus trichocarpa]
           gi|222845420|gb|EEE82967.1| argonaute protein group
           [Populus trichocarpa]
          Length = 904

 Score = 43.9 bits (102), Expect(2) = 8e-07
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = -2

Query: 181 RKDTTRLFPADHNNQNLTDRSGNILPG 101
           ++  TR FPADH+ ++LTDRSGNILPG
Sbjct: 758 KRHHTRFFPADHSKRDLTDRSGNILPG 784



 Score = 33.9 bits (76), Expect(2) = 8e-07
 Identities = 14/16 (87%), Positives = 15/16 (93%)
 Frame = -1

Query: 206 PPVTFVVVQKRYHTSF 159
           PPVTFVVVQKR+HT F
Sbjct: 749 PPVTFVVVQKRHHTRF 764


>ref|XP_002464076.1| hypothetical protein SORBIDRAFT_01g011880 [Sorghum bicolor]
            gi|241917930|gb|EER91074.1| hypothetical protein
            SORBIDRAFT_01g011880 [Sorghum bicolor]
          Length = 1087

 Score = 41.2 bits (95), Expect(2) = 6e-06
 Identities = 18/27 (66%), Positives = 20/27 (74%)
 Frame = -2

Query: 181  RKDTTRLFPADHNNQNLTDRSGNILPG 101
            ++  TRLFP DH  Q  TDRSGNILPG
Sbjct: 936  KRHHTRLFPEDHRAQGQTDRSGNILPG 962



 Score = 33.5 bits (75), Expect(2) = 6e-06
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = -1

Query: 209 LPPVTFVVVQKRYHT 165
           LPPVTFVVVQKR+HT
Sbjct: 926 LPPVTFVVVQKRHHT 940


Top