BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00035019
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containi...    55   8e-06

>ref|XP_004137012.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
           gi|449493172|ref|XP_004159212.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g03540-like [Cucumis sativus]
          Length = 605

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 21/45 (46%), Positives = 35/45 (77%)
 Frame = +2

Query: 5   DMVMKTALIDMYVKCKCINNAYRIFKDEIPVKDEVTWTLMLSGFS 139
           D+++++AL+D+Y KC CIN AYR+F D +P ++ +TW  M+ GF+
Sbjct: 395 DVIVESALVDLYAKCGCINFAYRVF-DRMPTRNLITWNSMIHGFA 438