BLASTX nr result
ID: Coptis24_contig00035012
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00035012 (299 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264328.2| PREDICTED: small RNA 2'-O-methyltransferase-... 104 9e-21 emb|CBI31031.3| unnamed protein product [Vitis vinifera] 104 9e-21 pdb|3HTX|A Chain A, Crystal Structure Of Small Rna Methyltransfe... 102 2e-20 gb|AAL05056.1|AF411383_1 HEN1 [Arabidopsis thaliana] 102 2e-20 ref|XP_004135729.1| PREDICTED: small RNA 2'-O-methyltransferase-... 102 3e-20 >ref|XP_002264328.2| PREDICTED: small RNA 2'-O-methyltransferase-like [Vitis vinifera] Length = 948 Score = 104 bits (259), Expect = 9e-21 Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 1/92 (1%) Frame = -1 Query: 275 VGETPAVVLKNPPPNPKTIIYQKYGQNAKYTMKEVLESVQNGCPGLPL-QKGPCLYRCTL 99 +G P VV K PK II+QK+G A Y ++EV QNGCPGL + QKGPCL+RC+L Sbjct: 1 MGGAPPVVAKKTTHTPKAIIHQKFGDKACYKVEEVQGDTQNGCPGLAIPQKGPCLFRCSL 60 Query: 98 ELPELSITSEPFKRKKDAMQAVSKLAIEKLGI 3 +LPE S+ SE FKRKKDA Q+ ++ A+ KLG+ Sbjct: 61 QLPEFSVVSEYFKRKKDAEQSAAEKALRKLGV 92 >emb|CBI31031.3| unnamed protein product [Vitis vinifera] Length = 931 Score = 104 bits (259), Expect = 9e-21 Identities = 50/92 (54%), Positives = 65/92 (70%), Gaps = 1/92 (1%) Frame = -1 Query: 275 VGETPAVVLKNPPPNPKTIIYQKYGQNAKYTMKEVLESVQNGCPGLPL-QKGPCLYRCTL 99 +G P VV K PK II+QK+G A Y ++EV QNGCPGL + QKGPCL+RC+L Sbjct: 1 MGGAPPVVAKKTTHTPKAIIHQKFGDKACYKVEEVQGDTQNGCPGLAIPQKGPCLFRCSL 60 Query: 98 ELPELSITSEPFKRKKDAMQAVSKLAIEKLGI 3 +LPE S+ SE FKRKKDA Q+ ++ A+ KLG+ Sbjct: 61 QLPEFSVVSEYFKRKKDAEQSAAEKALRKLGV 92 >pdb|3HTX|A Chain A, Crystal Structure Of Small Rna Methyltransferase Hen1 gi|260099983|pdb|3HTX|D Chain D, Crystal Structure Of Small Rna Methyltransferase Hen1 Length = 950 Score = 102 bits (255), Expect = 2e-20 Identities = 47/79 (59%), Positives = 63/79 (79%), Gaps = 1/79 (1%) Frame = -1 Query: 236 PNPKTIIYQKYGQNAKYTMKEVLESVQNGCPGLPL-QKGPCLYRCTLELPELSITSEPFK 60 P PK II+QK+G A YT++EV +S Q+GCPGL + QKGPCLYRC L+LPE S+ S FK Sbjct: 17 PTPKAIIHQKFGAKASYTVEEVHDSSQSGCPGLAIPQKGPCLYRCHLQLPEFSVVSNVFK 76 Query: 59 RKKDAMQAVSKLAIEKLGI 3 +KKD+ Q+ ++LA++KLGI Sbjct: 77 KKKDSEQSAAELALDKLGI 95 >gb|AAL05056.1|AF411383_1 HEN1 [Arabidopsis thaliana] Length = 942 Score = 102 bits (255), Expect = 2e-20 Identities = 47/79 (59%), Positives = 63/79 (79%), Gaps = 1/79 (1%) Frame = -1 Query: 236 PNPKTIIYQKYGQNAKYTMKEVLESVQNGCPGLPL-QKGPCLYRCTLELPELSITSEPFK 60 P PK II+QK+G A YT++EV +S Q+GCPGL + QKGPCLYRC L+LPE S+ S FK Sbjct: 9 PTPKAIIHQKFGAKASYTVEEVHDSSQSGCPGLAIPQKGPCLYRCHLQLPEFSVVSNVFK 68 Query: 59 RKKDAMQAVSKLAIEKLGI 3 +KKD+ Q+ ++LA++KLGI Sbjct: 69 KKKDSEQSAAELALDKLGI 87 >ref|XP_004135729.1| PREDICTED: small RNA 2'-O-methyltransferase-like [Cucumis sativus] Length = 948 Score = 102 bits (254), Expect = 3e-20 Identities = 49/83 (59%), Positives = 63/83 (75%), Gaps = 1/83 (1%) Frame = -1 Query: 248 KNPPPNPKTIIYQKYGQNAKYTMKEVLESVQNGCPGLPL-QKGPCLYRCTLELPELSITS 72 + P PK +I+QK+G A YT++EV E QNGCPGL + QKG CLYRC LELP++S+ S Sbjct: 8 RKPVLTPKAVIHQKFGSKACYTIEEVHEPPQNGCPGLAIAQKGACLYRCNLELPDVSVVS 67 Query: 71 EPFKRKKDAMQAVSKLAIEKLGI 3 FKRK+DA Q+ ++LAIEKLGI Sbjct: 68 GTFKRKRDAEQSAAELAIEKLGI 90