BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034980
         (383 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-53
emb|CBI33742.3| unnamed protein product [Vitis vinifera]              205   4e-51
ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containi...   205   4e-51
emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]   205   4e-51
ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47

>ref|XP_002332237.1| predicted protein [Populus trichocarpa] gi|222831850|gb|EEE70327.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  213 bits (543), Expect = 1e-53
 Identities = 99/126 (78%), Positives = 116/126 (92%)
 Frame = +2

Query: 5   DGRRFFNSMKEAYGIEPKVEHYGCMVDLLGRAGFLDEAYELVKCMKMDPDPVLWGTLLAS 184
           +G +FF SMK+ YGIEPKVEHYGCMV+LLGRAG+L+EAYELVK M++D DPVLWGTLL +
Sbjct: 191 EGWKFFYSMKDEYGIEPKVEHYGCMVNLLGRAGYLEEAYELVKNMEIDQDPVLWGTLLGA 250

Query: 185 CRLHGNMALGEHIAEFLVNNGLANSGTYILLSNIYAAAGNWDGVARMRTLMKDSGIQKEP 364
           CRLHGN+ALGE IAE+LV+  LANSGTY+LLSNIYAAAGNW+GVAR+RTLMK+SG +KEP
Sbjct: 251 CRLHGNIALGEQIAEYLVSQNLANSGTYVLLSNIYAAAGNWEGVARVRTLMKESGFEKEP 310

Query: 365 GCSSIE 382
           GCSSIE
Sbjct: 311 GCSSIE 316


>emb|CBI33742.3| unnamed protein product [Vitis vinifera]
          Length = 562

 Score =  205 bits (521), Expect = 4e-51
 Identities = 94/126 (74%), Positives = 110/126 (87%)
 Frame = +2

Query: 5   DGRRFFNSMKEAYGIEPKVEHYGCMVDLLGRAGFLDEAYELVKCMKMDPDPVLWGTLLAS 184
           +G   FN MK+ YGIEPK+EHYGCMV+LLGRAG +++AYELVK M ++PDPVLWGTLL +
Sbjct: 309 EGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA 368

Query: 185 CRLHGNMALGEHIAEFLVNNGLANSGTYILLSNIYAAAGNWDGVARMRTLMKDSGIQKEP 364
           CRLHG +ALGE I E LV+  LANSGTYILLSNIYAA GNWDGVAR+RT+MKDSG++KEP
Sbjct: 369 CRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEP 428

Query: 365 GCSSIE 382
           GCSSIE
Sbjct: 429 GCSSIE 434


>ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  205 bits (521), Expect = 4e-51
 Identities = 94/126 (74%), Positives = 110/126 (87%)
 Frame = +2

Query: 5   DGRRFFNSMKEAYGIEPKVEHYGCMVDLLGRAGFLDEAYELVKCMKMDPDPVLWGTLLAS 184
           +G   FN MK+ YGIEPK+EHYGCMV+LLGRAG +++AYELVK M ++PDPVLWGTLL +
Sbjct: 375 EGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA 434

Query: 185 CRLHGNMALGEHIAEFLVNNGLANSGTYILLSNIYAAAGNWDGVARMRTLMKDSGIQKEP 364
           CRLHG +ALGE I E LV+  LANSGTYILLSNIYAA GNWDGVAR+RT+MKDSG++KEP
Sbjct: 435 CRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEP 494

Query: 365 GCSSIE 382
           GCSSIE
Sbjct: 495 GCSSIE 500


>emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  205 bits (521), Expect = 4e-51
 Identities = 94/126 (74%), Positives = 110/126 (87%)
 Frame = +2

Query: 5   DGRRFFNSMKEAYGIEPKVEHYGCMVDLLGRAGFLDEAYELVKCMKMDPDPVLWGTLLAS 184
           +G   FN MK+ YGIEPK+EHYGCMV+LLGRAG +++AYELVK M ++PDPVLWGTLL +
Sbjct: 322 EGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGA 381

Query: 185 CRLHGNMALGEHIAEFLVNNGLANSGTYILLSNIYAAAGNWDGVARMRTLMKDSGIQKEP 364
           CRLHG +ALGE I E LV+  LANSGTYILLSNIYAA GNWDGVAR+RT+MKDSG++KEP
Sbjct: 382 CRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEP 441

Query: 365 GCSSIE 382
           GCSSIE
Sbjct: 442 GCSSIE 447


>ref|XP_003550993.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Glycine max]
          Length = 628

 Score =  192 bits (488), Expect = 2e-47
 Identities = 87/125 (69%), Positives = 111/125 (88%)
 Frame = +2

Query: 8   GRRFFNSMKEAYGIEPKVEHYGCMVDLLGRAGFLDEAYELVKCMKMDPDPVLWGTLLASC 187
           G   F+SMK+ YG+EPKVEHYGCMV+LLGRAG + EAY+LV+ M+++PDPVLWGTLL +C
Sbjct: 376 GWEVFDSMKDGYGMEPKVEHYGCMVNLLGRAGRMQEAYDLVRSMEVEPDPVLWGTLLWAC 435

Query: 188 RLHGNMALGEHIAEFLVNNGLANSGTYILLSNIYAAAGNWDGVARMRTLMKDSGIQKEPG 367
           R+H N++LGE IAE LV+NGLA+SGTY+LLSN+YAAA NW GVA++R++MK SG++KEPG
Sbjct: 436 RIHSNVSLGEEIAEILVSNGLASSGTYVLLSNMYAAARNWVGVAKVRSMMKGSGVEKEPG 495

Query: 368 CSSIE 382
           CSSIE
Sbjct: 496 CSSIE 500