BLASTX nr result

ID: Coptis24_contig00034955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034955
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311388.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002270857.2| PREDICTED: uncharacterized protein LOC100246...    73   2e-11
emb|CBI36960.3| unnamed protein product [Vitis vinifera]               73   2e-11
ref|XP_002338965.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002318948.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11

>ref|XP_002311388.1| predicted protein [Populus trichocarpa] gi|222851208|gb|EEE88755.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 32/42 (76%), Positives = 37/42 (88%)
 Frame = -3

Query: 263 ENCAGPSCTNAYKYLDSKSKLPLCSLQCYKAVNDQMQPVSTC 138
           E CAGP+CTNAYKY DSKSKLPLCSL CYKA++ +MQP+ TC
Sbjct: 381 EKCAGPNCTNAYKYRDSKSKLPLCSLHCYKAIHGKMQPLITC 422


>ref|XP_002270857.2| PREDICTED: uncharacterized protein LOC100246939 [Vitis vinifera]
          Length = 586

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/42 (73%), Positives = 35/42 (83%)
 Frame = -3

Query: 263 ENCAGPSCTNAYKYLDSKSKLPLCSLQCYKAVNDQMQPVSTC 138
           E CAGPSCTN YKY DSKSKLPLCSL CYKA++ +MQ  +TC
Sbjct: 545 EKCAGPSCTNPYKYRDSKSKLPLCSLHCYKAIHKRMQAETTC 586


>emb|CBI36960.3| unnamed protein product [Vitis vinifera]
          Length = 498

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 31/42 (73%), Positives = 35/42 (83%)
 Frame = -3

Query: 263 ENCAGPSCTNAYKYLDSKSKLPLCSLQCYKAVNDQMQPVSTC 138
           E CAGPSCTN YKY DSKSKLPLCSL CYKA++ +MQ  +TC
Sbjct: 457 EKCAGPSCTNPYKYRDSKSKLPLCSLHCYKAIHKRMQAETTC 498


>ref|XP_002338965.1| predicted protein [Populus trichocarpa] gi|222874113|gb|EEF11244.1|
           predicted protein [Populus trichocarpa]
          Length = 93

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 29/42 (69%), Positives = 37/42 (88%)
 Frame = -3

Query: 263 ENCAGPSCTNAYKYLDSKSKLPLCSLQCYKAVNDQMQPVSTC 138
           E CA PSCTN YKY DS+SKLPLCSLQCYKA+++++QP++ C
Sbjct: 52  EKCAAPSCTNPYKYRDSESKLPLCSLQCYKAIHEKVQPLTAC 93


>ref|XP_002318948.1| predicted protein [Populus trichocarpa] gi|222857324|gb|EEE94871.1|
           predicted protein [Populus trichocarpa]
          Length = 539

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 29/42 (69%), Positives = 37/42 (88%)
 Frame = -3

Query: 263 ENCAGPSCTNAYKYLDSKSKLPLCSLQCYKAVNDQMQPVSTC 138
           E CA PSCTN YKY DS+SKLPLCSLQCYKA+++++QP++ C
Sbjct: 498 EKCAAPSCTNPYKYRDSESKLPLCSLQCYKAIHEKVQPLTAC 539


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