BLASTX nr result

ID: Coptis24_contig00034946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034946
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29991.3| unnamed protein product [Vitis vinifera]              135   5e-30
ref|XP_002275932.1| PREDICTED: DNA (cytosine-5)-methyltransferas...   135   5e-30
ref|XP_002283355.2| PREDICTED: DNA (cytosine-5)-methyltransferas...   130   1e-28
gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]     130   1e-28
ref|XP_002530367.1| protein with unknown function [Ricinus commu...   130   1e-28

>emb|CBI29991.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/87 (73%), Positives = 72/87 (82%)
 Frame = +1

Query: 4   VQKNNQSSMNLLDLYAGCGAMSTGLCLGAAKSGLKLITRWAVDYNQYACSSLKLNHPDTE 183
           V K   S M LLDLY+GCGAMSTGLCLGA+ SGLKL+TRWAVD N +AC SLKLNHP+TE
Sbjct: 244 VHKFQGSGMTLLDLYSGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPETE 303

Query: 184 VRNESAEDFLALLQAWQQLCGQFSLLG 264
           VRNE+AEDFL+LL+ W  LC  FSLLG
Sbjct: 304 VRNEAAEDFLSLLKEWATLCEDFSLLG 330


>ref|XP_002275932.1| PREDICTED: DNA (cytosine-5)-methyltransferase 1-like [Vitis
           vinifera]
          Length = 829

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/87 (73%), Positives = 72/87 (82%)
 Frame = +1

Query: 4   VQKNNQSSMNLLDLYAGCGAMSTGLCLGAAKSGLKLITRWAVDYNQYACSSLKLNHPDTE 183
           V K   S M LLDLY+GCGAMSTGLCLGA+ SGLKL+TRWAVD N +AC SLKLNHP+TE
Sbjct: 246 VHKFQGSGMTLLDLYSGCGAMSTGLCLGASLSGLKLVTRWAVDINPHACESLKLNHPETE 305

Query: 184 VRNESAEDFLALLQAWQQLCGQFSLLG 264
           VRNE+AEDFL+LL+ W  LC  FSLLG
Sbjct: 306 VRNEAAEDFLSLLKEWATLCEDFSLLG 332


>ref|XP_002283355.2| PREDICTED: DNA (cytosine-5)-methyltransferase CMT3-like [Vitis
           vinifera]
          Length = 956

 Score =  130 bits (327), Expect = 1e-28
 Identities = 57/86 (66%), Positives = 74/86 (86%)
 Frame = +1

Query: 7   QKNNQSSMNLLDLYAGCGAMSTGLCLGAAKSGLKLITRWAVDYNQYACSSLKLNHPDTEV 186
           ++ + S M LLDLY+GCGAMS+GLCLGA  SG+ L+TRWA+D N YAC S++LNHP+T+V
Sbjct: 380 RERSLSEMTLLDLYSGCGAMSSGLCLGAKMSGVNLVTRWAIDINAYACESVRLNHPETQV 439

Query: 187 RNESAEDFLALLQAWQQLCGQFSLLG 264
           RNESAEDFLALL+ W++LC +FSL+G
Sbjct: 440 RNESAEDFLALLREWEKLCVRFSLIG 465


>gb|ABW96889.1| CMT-type DNA-methyltransferase [Elaeis guineensis]
          Length = 925

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/79 (75%), Positives = 69/79 (87%)
 Frame = +1

Query: 28  MNLLDLYAGCGAMSTGLCLGAAKSGLKLITRWAVDYNQYACSSLKLNHPDTEVRNESAED 207
           ++LLDLY+GCGAMSTGLCLGA  SGLKL TRWAVD N YAC SLKLNHP TEVRNE AED
Sbjct: 351 LSLLDLYSGCGAMSTGLCLGANLSGLKLETRWAVDINPYACESLKLNHPHTEVRNEKAED 410

Query: 208 FLALLQAWQQLCGQFSLLG 264
           FLALL+ W++LC +F+L+G
Sbjct: 411 FLALLREWEKLCAKFNLIG 429


>ref|XP_002530367.1| protein with unknown function [Ricinus communis]
           gi|223530114|gb|EEF32028.1| protein with unknown
           function [Ricinus communis]
          Length = 845

 Score =  130 bits (326), Expect = 1e-28
 Identities = 57/87 (65%), Positives = 74/87 (85%)
 Frame = +1

Query: 4   VQKNNQSSMNLLDLYAGCGAMSTGLCLGAAKSGLKLITRWAVDYNQYACSSLKLNHPDTE 183
           V  + +S + LLDLY+GCGAMSTGLC+GA+ SG+KL+T+WAVD N +AC SLK NHP+TE
Sbjct: 267 VHSSEKSELYLLDLYSGCGAMSTGLCMGASLSGVKLVTKWAVDINAFACKSLKTNHPETE 326

Query: 184 VRNESAEDFLALLQAWQQLCGQFSLLG 264
           VRNE+AEDFL+LL+ W++LC +FSL G
Sbjct: 327 VRNEAAEDFLSLLKEWEKLCRKFSLFG 353


Top