BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034944
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555635.1| PREDICTED: high mobility group B protein 15-...    75   7e-12
ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-...    74   1e-11
emb|CBI17313.3| unnamed protein product [Vitis vinifera]               72   5e-11
ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-...    72   5e-11
emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera]    72   5e-11

>ref|XP_003555635.1| PREDICTED: high mobility group B protein 15-like [Glycine max]
          Length = 419

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 50/123 (40%), Positives = 60/123 (48%), Gaps = 18/123 (14%)
 Frame = -1

Query: 315 STAPVPP------------------ISEVQVASVQEQRKASLLGSHVMGVIDGKFEHGYL 190
           ST PVPP                  +S V  A + E   AS  GS V+GVIDGKFE GYL
Sbjct: 144 STLPVPPPKMQFQQPLSETQPAVFQLSNVNAAKLPEAMAASSAGSPVIGVIDGKFESGYL 203

Query: 189 VTVSVGTEKLQGVLYHLFSNPTDHAPSHTVVSANKKGRDTAPLAVXXXXXXXXXXXXXRD 10
           VTV++G+EKL+GVLY    NP   A  H+  + N     +A L V             RD
Sbjct: 204 VTVTIGSEKLKGVLYQAPQNPVLTASHHSASANNNNA--SASLGVHRRRRRKKSEIKRRD 261

Query: 9   PAH 1
           PAH
Sbjct: 262 PAH 264


>ref|XP_003536791.1| PREDICTED: high mobility group B protein 15-like [Glycine max]
          Length = 425

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 52/123 (42%), Positives = 62/123 (50%), Gaps = 18/123 (14%)
 Frame = -1

Query: 315 STAPVPP--------ISEVQVASVQ----------EQRKASLLGSHVMGVIDGKFEHGYL 190
           ST PVPP        +SE+Q A  Q          E   AS  GS V+GVIDGKFE GYL
Sbjct: 145 STLPVPPPKMQFPQPLSEIQPAVFQQSNINAAKLPEAMAASSAGSPVIGVIDGKFESGYL 204

Query: 189 VTVSVGTEKLQGVLYHLFSNPTDHAPSHTVVSANKKGRDTAPLAVXXXXXXXXXXXXXRD 10
           VTV++G+EKL+GVLY    NP   A  H+  + N     +A L V             RD
Sbjct: 205 VTVTIGSEKLKGVLYQAPQNPVLVASHHSASAKNNNA--SASLGVHRRRRRKKSEIKRRD 262

Query: 9   PAH 1
           PAH
Sbjct: 263 PAH 265


>emb|CBI17313.3| unnamed protein product [Vitis vinifera]
          Length = 483

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 47/113 (41%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
 Frame = -1

Query: 306 PVPPISEVQVASVQEQR-----------KASLLGSHVMGVIDGKFEHGYLVTVSVGTEKL 160
           PV P  E Q A +Q+QR            AS   S V+GVIDGKFE GYLVTV++GTEKL
Sbjct: 178 PVLPSPESQPAGIQQQRISSADIFPGASPASSTASPVIGVIDGKFESGYLVTVTIGTEKL 237

Query: 159 QGVLYHLFSNPTDHAPSHTVVSANKKGRDTAPLAVXXXXXXXXXXXXXRDPAH 1
           +GVLY     P    P +  V  N      A   V             RDPAH
Sbjct: 238 KGVLYEAPQTPARQVPQYFSVITNNTESTPAAPTVHRRRRRKKSEIKKRDPAH 290


>ref|XP_002266394.1| PREDICTED: high mobility group B protein 15-like [Vitis vinifera]
          Length = 482

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 47/113 (41%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
 Frame = -1

Query: 306 PVPPISEVQVASVQEQR-----------KASLLGSHVMGVIDGKFEHGYLVTVSVGTEKL 160
           PV P  E Q A +Q+QR            AS   S V+GVIDGKFE GYLVTV++GTEKL
Sbjct: 177 PVLPSPESQPAGIQQQRISSADIFPGASPASSTASPVIGVIDGKFESGYLVTVTIGTEKL 236

Query: 159 QGVLYHLFSNPTDHAPSHTVVSANKKGRDTAPLAVXXXXXXXXXXXXXRDPAH 1
           +GVLY     P    P +  V  N      A   V             RDPAH
Sbjct: 237 KGVLYEAPQTPARQVPQYFSVITNNTESTPAAPTVHRRRRRKKSEIKKRDPAH 289


>emb|CAN83439.1| hypothetical protein VITISV_021289 [Vitis vinifera]
          Length = 461

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 47/113 (41%), Positives = 54/113 (47%), Gaps = 11/113 (9%)
 Frame = -1

Query: 306 PVPPISEVQVASVQEQR-----------KASLLGSHVMGVIDGKFEHGYLVTVSVGTEKL 160
           PV P  E Q A +Q+QR            AS   S V+GVIDGKFE GYLVTV++GTEKL
Sbjct: 156 PVLPSPESQPAGIQQQRISSADIFPGASPASSTASPVIGVIDGKFESGYLVTVTIGTEKL 215

Query: 159 QGVLYHLFSNPTDHAPSHTVVSANKKGRDTAPLAVXXXXXXXXXXXXXRDPAH 1
           +GVLY     P    P +  V  N      A   V             RDPAH
Sbjct: 216 KGVLYEAPQTPARQVPQYFSVITNNTESTPAAPTVHRRRRRKKSEIKKRDPAH 268