BLASTX nr result

ID: Coptis24_contig00034942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034942
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275878.2| PREDICTED: uncharacterized protein LOC100251...    89   5e-16
ref|XP_004140281.1| PREDICTED: uncharacterized protein LOC101207...    74   1e-11
ref|XP_003556742.1| PREDICTED: uncharacterized protein LOC100815...    72   4e-11
ref|XP_003528588.1| PREDICTED: uncharacterized protein LOC100816...    70   1e-10
ref|XP_003545161.1| PREDICTED: uncharacterized protein LOC100817...    66   3e-09

>ref|XP_002275878.2| PREDICTED: uncharacterized protein LOC100251674 [Vitis vinifera]
          Length = 445

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 59/98 (60%), Positives = 65/98 (66%), Gaps = 8/98 (8%)
 Frame = -3

Query: 275 SKQAVVATTRRLTSDSGAFADWVASSSTGR-ADDLSLGFN----AXXXXXXXXXXXXXXX 111
           +K AVVATTRRL SDSGAFADWVASSSTGR ADDLSLGFN    A               
Sbjct: 29  AKSAVVATTRRLPSDSGAFADWVASSSTGRAADDLSLGFNAGPAAAGNASSASGGGMWSS 88

Query: 110 XTRPINYSLSQD--MVGLRGGEVYVVAPASSF-HQHQH 6
            +R INY L  +  MVGLR  +V+VVAPASSF H +QH
Sbjct: 89  SSRQINYGLPHEMGMVGLR--DVFVVAPASSFHHNNQH 124


>ref|XP_004140281.1| PREDICTED: uncharacterized protein LOC101207487 [Cucumis sativus]
           gi|449482608|ref|XP_004156346.1| PREDICTED:
           uncharacterized protein LOC101228325 [Cucumis sativus]
          Length = 420

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 52/96 (54%), Positives = 57/96 (59%), Gaps = 9/96 (9%)
 Frame = -3

Query: 263 VVATTRRLTSDSGAFADWVA-SSSTGRA---DDLSLGFNA---XXXXXXXXXXXXXXXXT 105
           VVATTRRL SDSGAFADW A SSS  RA   DDLSLGFNA                    
Sbjct: 3   VVATTRRLPSDSGAFADWAAPSSSAARAAPPDDLSLGFNAAPSAAPPPGPPVSMWSAAAQ 62

Query: 104 RPINYSLSQD--MVGLRGGEVYVVAPASSFHQHQHQ 3
           R +NY    +  MVGLR  +VYVVAPASSF+Q+  Q
Sbjct: 63  RSLNYGFGSEMGMVGLR--DVYVVAPASSFNQNPQQ 96


>ref|XP_003556742.1| PREDICTED: uncharacterized protein LOC100815750 [Glycine max]
          Length = 417

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
 Frame = -3

Query: 272 KQAVVATTRRLTSDSGAFADWVA--SSSTGRADDLSLGFNAXXXXXXXXXXXXXXXXTRP 99
           + +VVATTRR  SDSGAFADW A  S+ +GR DDLSLGFNA                +R 
Sbjct: 26  RSSVVATTRRFPSDSGAFADWSAPPSAISGRGDDLSLGFNASSAATAHGGGAMWPGVSRS 85

Query: 98  INYSLSQDMVGLRGGEVYVVAPASSFHQHQH 6
            NY+L+         +++VVAPASSF+ H +
Sbjct: 86  FNYNLAPH------HDIFVVAPASSFYHHHN 110


>ref|XP_003528588.1| PREDICTED: uncharacterized protein LOC100816514 [Glycine max]
          Length = 518

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
 Frame = -3

Query: 281 VFSKQAVVATTRRLTSDSGAFADWVA--SSSTGRADDLSLGFNAXXXXXXXXXXXXXXXX 108
           VF+   +VATTR   SDSGAFADW A  S+ +GR DDLSLGFNA                
Sbjct: 134 VFACPPLVATTRWFPSDSGAFADWSAPPSAVSGRGDDLSLGFNASSATTHGGGAAMWPGA 193

Query: 107 TRPINYSLSQDMVGLRGGEVYVVAPASSFHQH 12
           +R  NY+++         +++VVAPASSFH H
Sbjct: 194 SRSFNYNMAPH------HDIFVVAPASSFHHH 219


>ref|XP_003545161.1| PREDICTED: uncharacterized protein LOC100817745 [Glycine max]
          Length = 415

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 45/97 (46%), Positives = 52/97 (53%), Gaps = 10/97 (10%)
 Frame = -3

Query: 266 AVVATTRRLTSDSGAFADWVASSSTGR---------ADDLSLGFNA-XXXXXXXXXXXXX 117
           +VVATTRRL SDSGAFADW A++S+G           DDLSLGFNA              
Sbjct: 9   SVVATTRRLPSDSGAFADWAATASSGAGGGGGRAVPVDDLSLGFNAGPAAAATGPTAGMW 68

Query: 116 XXXTRPINYSLSQDMVGLRGGEVYVVAPASSFHQHQH 6
               R INY      +G+     +VVAPASSFH H H
Sbjct: 69  STQARSINY----PEMGM-----FVVAPASSFHHHHH 96


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