BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034939
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25...    96   3e-18
ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|2...    92   3e-17
ref|XP_002531898.1| conserved hypothetical protein [Ricinus comm...    91   1e-16
ref|XP_004146198.1| PREDICTED: F-box/kelch-repeat protein SKIP25...    89   5e-16
ref|XP_003612576.1| F-box/kelch-repeat protein SKIP25 [Medicago ...    86   3e-15

>ref|XP_003516495.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Glycine max]
          Length = 375

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/82 (54%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
 Frame = +3

Query: 6   LLYSVSHSWRNLIYSPSFPPFLSLYALLS-SNDNSLVQFLSFDPISSTWXXXXXXXXXXX 182
           LL+S+SHSWR LIYSPSFPPF SLYA+LS S+ ++++QF +FDPIS+TW           
Sbjct: 54  LLFSISHSWRRLIYSPSFPPFFSLYAILSHSHSSAVIQFHTFDPISATWLPLPPHPPLHH 113

Query: 183 XXXXRHPSFIARNFPIQSISIA 248
               RHPSF++RN  +QS+S A
Sbjct: 114 LLLRRHPSFLSRNLSVQSVSAA 135


>ref|XP_002314220.1| predicted protein [Populus trichocarpa] gi|222850628|gb|EEE88175.1|
           predicted protein [Populus trichocarpa]
          Length = 397

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 50/88 (56%), Positives = 56/88 (63%), Gaps = 8/88 (9%)
 Frame = +3

Query: 3   SLLYSVSHSWRNLIYSPSFPPFLSLYALLSSN-------DNSLVQFLSFDPISSTW-XXX 158
           S LYSV HSWR LIYSPSFPPF SLYA+LSS        DN+ +QF +FDPISS W    
Sbjct: 54  STLYSVCHSWRRLIYSPSFPPFFSLYAVLSSTNTNHNLPDNNSIQFFNFDPISSRWDSLP 113

Query: 159 XXXXXXXXXXXXRHPSFIARNFPIQSIS 242
                       RHPSFI+R+ PIQSIS
Sbjct: 114 PPPPDPPLHLILRHPSFISRDLPIQSIS 141


>ref|XP_002531898.1| conserved hypothetical protein [Ricinus communis]
           gi|223528465|gb|EEF30497.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 399

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 8/90 (8%)
 Frame = +3

Query: 3   SLLYSVSHSWRNLIYSPSFPPFLSLYALLSS-------NDNSLVQFLSFDPISSTW-XXX 158
           SLLYSV HSWR LIYSP+FPPFLSLYA+LSS       + ++ ++F +FDPISSTW    
Sbjct: 49  SLLYSVCHSWRRLIYSPAFPPFLSLYAVLSSINTDRYGDCSNSIKFFNFDPISSTWDLLP 108

Query: 159 XXXXXXXXXXXXRHPSFIARNFPIQSISIA 248
                       RHPSFI+R+ PIQS++++
Sbjct: 109 PPPPDPPLRPIIRHPSFISRHLPIQSVTVS 138


>ref|XP_004146198.1| PREDICTED: F-box/kelch-repeat protein SKIP25-like [Cucumis sativus]
           gi|449521327|ref|XP_004167681.1| PREDICTED:
           F-box/kelch-repeat protein SKIP25-like [Cucumis sativus]
          Length = 375

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/83 (54%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
 Frame = +3

Query: 3   SLLYSVSHSWRNLIYSPSFPPFLSLYALLSSNDNSLVQFLSFDPISSTW-XXXXXXXXXX 179
           SLL+SVS SWR L+YSPSFPPF SLYALLSS+ NSL  F +FDPISS W           
Sbjct: 49  SLLFSVSRSWRRLLYSPSFPPFSSLYALLSSSSNSL-DFFNFDPISSKWSPLPPPPNSPS 107

Query: 180 XXXXXRHPSFIARNFPIQSISIA 248
                 HPSF++R+ P+QS++++
Sbjct: 108 SHLLIHHPSFLSRHLPVQSLTVS 130


>ref|XP_003612576.1| F-box/kelch-repeat protein SKIP25 [Medicago truncatula]
           gi|355513911|gb|AES95534.1| F-box/kelch-repeat protein
           SKIP25 [Medicago truncatula]
          Length = 380

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
 Frame = +3

Query: 3   SLLYSVSHSWRNLIYSPSFPPFLSLYALLS---SNDNSLVQFLSFDPISSTWXXXXXXXX 173
           SLL+ V HSWR LIYSPSFPPF SLYA+LS   S+ +  +QF +FDPIS+TW        
Sbjct: 60  SLLFKVCHSWRRLIYSPSFPPFFSLYAILSPPKSHHSHSIQFHNFDPISNTW-KILPPPP 118

Query: 174 XXXXXXXRHPSFIARNFPIQSISIA 248
                   HPSF++RN  +QSIS++
Sbjct: 119 PLHHILLHHPSFLSRNLSVQSISVS 143