BLASTX nr result

ID: Coptis24_contig00034938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034938
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81941.1| hypothetical protein VITISV_007359 [Vitis vinifera]    65   6e-09
ref|XP_002284951.1| PREDICTED: glutathione synthetase, chloropla...    65   7e-09
ref|XP_004157260.1| PREDICTED: glutathione synthetase, chloropla...    62   6e-08
ref|XP_004135633.1| PREDICTED: glutathione synthetase, chloropla...    62   6e-08
gb|ACV72061.1| glutathione synthetase [Solanum lycopersicum]           61   8e-08

>emb|CAN81941.1| hypothetical protein VITISV_007359 [Vitis vinifera]
          Length = 70

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = -3

Query: 176 SFTSSFLPLKCGKVDINDTQDETSLKPIMGVENMNPELLQKMVYDSLVWCSLHGLVVG 3
           S +SSF+PL  GKVD  +TQ  ++++P+     ++  LLQ+MVYD+LVW SLHGLVVG
Sbjct: 9   SSSSSFVPLNSGKVDQVETQVGSAVRPLYDFHGIDEALLQRMVYDALVWSSLHGLVVG 66


>ref|XP_002284951.1| PREDICTED: glutathione synthetase, chloroplastic-like [Vitis
           vinifera]
          Length = 507

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 31/58 (53%), Positives = 43/58 (74%)
 Frame = -3

Query: 176 SFTSSFLPLKCGKVDINDTQDETSLKPIMGVENMNPELLQKMVYDSLVWCSLHGLVVG 3
           S +SSF+PL  GKVD  +TQ  ++++P+     ++  LLQ+MVYD+LVW SLHGLVVG
Sbjct: 9   SSSSSFVPLDSGKVDQVETQVGSAVRPLYDFHGIDEALLQRMVYDALVWSSLHGLVVG 66


>ref|XP_004157260.1| PREDICTED: glutathione synthetase, chloroplastic-like [Cucumis
           sativus]
          Length = 549

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = -3

Query: 176 SFTSSFLPLKCGKVDINDTQDETSLKPIMGVENMNPELLQKMVYDSLVWCSLHGLVVG 3
           S +S  LPLKC K    DTQ + SL+ +  V  ++ ELLQ+MVYD+LVW SLHGLVVG
Sbjct: 52  SSSSQVLPLKCSKAGEFDTQAK-SLRTMADVHGIDRELLQEMVYDALVWSSLHGLVVG 108


>ref|XP_004135633.1| PREDICTED: glutathione synthetase, chloroplastic-like [Cucumis
           sativus]
          Length = 547

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = -3

Query: 176 SFTSSFLPLKCGKVDINDTQDETSLKPIMGVENMNPELLQKMVYDSLVWCSLHGLVVG 3
           S +S  LPLKC K    DTQ + SL+ +  V  ++ ELLQ+MVYD+LVW SLHGLVVG
Sbjct: 50  SSSSQVLPLKCSKAGEFDTQAK-SLRTMADVHGIDRELLQEMVYDALVWSSLHGLVVG 106


>gb|ACV72061.1| glutathione synthetase [Solanum lycopersicum]
          Length = 546

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
 Frame = -3

Query: 284 GVTSSSTLPNTIYCSTLQTSTKPTTSFILKTPTK---PISFTSSFL-----PLKCGKVDI 129
           G +S S    TI  S  Q+    + S    +PT+   P    SS +     PLKC KV  
Sbjct: 4   GCSSPSISLTTIATSHFQSQESLSNSLNFYSPTRFLEPHLLKSSKIFIPKSPLKCAKVPE 63

Query: 128 NDTQDETSLKPIMGVENMNPELLQKMVYDSLVWCSLHGLVVG 3
             TQ E S KPI+   +++ +L+QK+  D+LVWCSL GL+VG
Sbjct: 64  MQTQLEDSAKPIVDPHDIDSKLVQKLANDALVWCSLRGLLVG 105


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