BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034929
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   135   3e-30
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   127   1e-27
ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cuc...   102   2e-20
ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cuc...   102   2e-20
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...   102   3e-20

>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score =  135 bits (340), Expect = 3e-30
 Identities = 72/138 (52%), Positives = 92/138 (66%), Gaps = 2/138 (1%)
 Frame = -3

Query: 410 SASAVSNDDNLLREFFFRLPVKSILRFKSVSKHCLSLISDPYMVHSYNLRNSPPISGVFL 231
           SA  V+++D+LL E   RLP+KS+L+FKSVSKH LSLI+DP+     NL+ +P +S +F 
Sbjct: 13  SAHIVASNDDLLSELLLRLPIKSLLKFKSVSKHWLSLITDPHFSRRKNLKPNP-VSALF- 70

Query: 230 HRTSILGNPEFEFISLDSTTKSAPFKSLTFVNDPVGIKILQSCNGLLCCSS--FRTNSKT 57
                       F+ LD    SAPF SLTFV+ P GI+ILQSCNGL CCSS  +  + + 
Sbjct: 71  -----------SFVPLDPLQTSAPFTSLTFVDHPRGIEILQSCNGLFCCSSVDYNDSERK 119

Query: 56  YYIYNPTTKQYTILPKAC 3
           YYIYNPTTKQ+T LP  C
Sbjct: 120 YYIYNPTTKQFTTLPPLC 137


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  127 bits (318), Expect = 1e-27
 Identities = 67/139 (48%), Positives = 90/139 (64%), Gaps = 3/139 (2%)
 Frame = -3

Query: 410 SASAVSNDDNLLREFFFRLPVKSILRFKSVSKHCLSLISDPYMVHSYNLRNSPPISGVFL 231
           SA  V+ + +LL E F R PVK +LRF+SVSK  LSLISDP+  H +  R+S  + GV L
Sbjct: 28  SAEQVAGNGDLLTEIFLRTPVKPLLRFRSVSKRWLSLISDPHFCHRHARRSSASVPGVLL 87

Query: 230 HRTSILGNPEFEFISLDSTTKS-APFKSLTFVNDPVGIKILQSCNGLLCCSSFRT--NSK 60
                L N  F+FIS D    S  P +SL F+ DP+G+K+LQ CNGLLCCS+ R+   S+
Sbjct: 88  G----LPNSNFDFISFDEKKASEPPLRSLDFIGDPLGVKVLQVCNGLLCCSTVRSLGTSR 143

Query: 59  TYYIYNPTTKQYTILPKAC 3
            YYI N  T+++++LP  C
Sbjct: 144 NYYICNLATRRFSVLPPPC 162


>ref|XP_004158152.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 4/130 (3%)
 Frame = -3

Query: 389 DDNLLREFFFRLPVKSILRFKSVSKHCLSLISDPYMVHSYNLRN--SPPISGVFLHRTSI 216
           +D+L  +   RLP++S+LRFKSVSK  LSLIS+P   H   + +  +P  SG+F  R + 
Sbjct: 19  NDDLFFQILLRLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPSGIFFPRPTP 78

Query: 215 LGNPEFEFISLDSTTKSAPFKSLTFVNDPVGIKILQSCNGLLCCSSFRTNSKT--YYIYN 42
             +P F+FI+  +     PF+S  F +D  G  ILQSCNGL  CS++  N  T  +YI+N
Sbjct: 79  K-SPPFDFINFTTNPSRPPFESPHFADDKHGFLILQSCNGLFLCSTYNGNYSTRDFYIHN 137

Query: 41  PTTKQYTILP 12
           PTT  +T LP
Sbjct: 138 PTTNHHTKLP 147


>ref|XP_004143739.1| PREDICTED: F-box protein At5g07610-like [Cucumis sativus]
          Length = 393

 Score =  102 bits (255), Expect = 2e-20
 Identities = 57/130 (43%), Positives = 80/130 (61%), Gaps = 4/130 (3%)
 Frame = -3

Query: 389 DDNLLREFFFRLPVKSILRFKSVSKHCLSLISDPYMVHSYNLRN--SPPISGVFLHRTSI 216
           +D+L  +   RLP++S+LRFKSVSK  LSLIS+P   H   + +  +P  SG+F  R + 
Sbjct: 19  NDDLFFQILLRLPIRSLLRFKSVSKRWLSLISNPNFSHRRTISHHPNPTPSGIFFPRPTP 78

Query: 215 LGNPEFEFISLDSTTKSAPFKSLTFVNDPVGIKILQSCNGLLCCSSFRTNSKT--YYIYN 42
             +P F+FI+  +     PF+S  F +D  G  ILQSCNGL  CS++  N  T  +YI+N
Sbjct: 79  K-SPPFDFINFTTNPSRPPFESPHFADDKHGFLILQSCNGLFLCSTYNGNYSTRDFYIHN 137

Query: 41  PTTKQYTILP 12
           PTT  +T LP
Sbjct: 138 PTTNHHTKLP 147


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score =  102 bits (254), Expect = 3e-20
 Identities = 63/138 (45%), Positives = 85/138 (61%), Gaps = 4/138 (2%)
 Frame = -3

Query: 413 LSASAVSNDDNLLREFFFRLPVKSILRFKSVSKHCLSLISDPYMVHSYNLRN-SPPISGV 237
           LSA  + ++++L+ +   RLPVK +LRFKSVSK  LSLIS P+    + LRN +  IS +
Sbjct: 5   LSAEIIGSNEDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLHTLRNPNHTISAL 64

Query: 236 FLHRTSILGNPEFEFISLDSTTKSAPFKSLTFVNDPV-GIKILQSCNGLLCCSSFRT--N 66
           FL  + +    EF+F+SL S++ S+   +     D   GIKILQSCNGLL CS+      
Sbjct: 65  FLRNSPL----EFKFLSLSSSSSSSSSSASPLSFDLFHGIKILQSCNGLLLCSTLPKIGQ 120

Query: 65  SKTYYIYNPTTKQYTILP 12
            + YYI NPTTKQ   LP
Sbjct: 121 KRNYYISNPTTKQMFTLP 138