BLASTX nr result

ID: Coptis24_contig00034921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034921
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321809.1| predicted protein [Populus trichocarpa] gi|2...   102   3e-20
ref|XP_002277133.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 ...   100   2e-19
emb|CBI27173.3| unnamed protein product [Vitis vinifera]               97   1e-18
emb|CAN72995.1| hypothetical protein VITISV_030744 [Vitis vinifera]    95   7e-18
emb|CBI27174.3| unnamed protein product [Vitis vinifera]               94   1e-17

>ref|XP_002321809.1| predicted protein [Populus trichocarpa] gi|222868805|gb|EEF05936.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  102 bits (255), Expect = 3e-20
 Identities = 53/107 (49%), Positives = 72/107 (67%), Gaps = 4/107 (3%)
 Frame = +1

Query: 7   SASAKPHYEGDPNEVELVGPVIK--IKPRGLDIIWGNDKRYWRIP--TKNDNGSAELIQV 174
           S+S KPHYE D N+V+  G   +   KPRG  IIWGND+RYW +P  + +D   AEL+QV
Sbjct: 2   SSSNKPHYEADTNKVQYDGEKNRWTFKPRGFSIIWGNDRRYWNLPDQSSSDETPAELVQV 61

Query: 175 CWLEVTALVPLSRLQVGKKYNVRFDVSLKADAFGWNKQTPLYLAAKI 315
           CWLE+T       L+ G KY ++F+VS+K DAFGWN   P+++ AK+
Sbjct: 62  CWLELTGTTK-DPLKEG-KYKIKFEVSMKKDAFGWN-GCPVFMMAKL 105


>ref|XP_002277133.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9 [Vitis vinifera]
           gi|297737974|emb|CBI27175.3| unnamed protein product
           [Vitis vinifera]
          Length = 179

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
 Frame = +1

Query: 10  ASAKPHYEGD--PNEVELVGPVIK-IKPRGLDIIWGNDKRYWRIPTKNDNGSAELIQVCW 180
           +S  PH++ +  P      G ++    PR L++IWG D RYW++P KN  G AEL+QVCW
Sbjct: 2   SSTTPHHDAEEPPQLQSKDGKLMATFNPRQLNVIWGRDPRYWKMPEKNSGGPAELLQVCW 61

Query: 181 LEVTALVPLSRLQVGKKYNVRFDVSLKADAFGWNKQTPLYLAAK 312
           LEV+  VP+    +G K+ + F VS K+DAFGWN   P+Y+ AK
Sbjct: 62  LEVSGSVPIRSAPIGTKFKITFQVSFKSDAFGWN-NCPVYVMAK 104


>emb|CBI27173.3| unnamed protein product [Vitis vinifera]
          Length = 177

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 45/104 (43%), Positives = 66/104 (63%), Gaps = 3/104 (2%)
 Frame = +1

Query: 10  ASAKPHYEG-DPNEVELVGPVIK--IKPRGLDIIWGNDKRYWRIPTKNDNGSAELIQVCW 180
           +S  PH++  DP +++     +     PR L++IWG + RYW++P KN    AEL+QVCW
Sbjct: 2   SSTAPHHDAEDPPQLQSKDGKLMATFNPRQLNVIWGGNLRYWKMPEKNSGSPAELLQVCW 61

Query: 181 LEVTALVPLSRLQVGKKYNVRFDVSLKADAFGWNKQTPLYLAAK 312
           LEV+  VP+    +G K+ + F VS K+DAFGWN   P+Y+ AK
Sbjct: 62  LEVSGSVPIRSASIGTKFRITFQVSFKSDAFGWN-NCPVYVMAK 104


>emb|CAN72995.1| hypothetical protein VITISV_030744 [Vitis vinifera]
          Length = 366

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 40/77 (51%), Positives = 54/77 (70%)
 Frame = +1

Query: 82  PRGLDIIWGNDKRYWRIPTKNDNGSAELIQVCWLEVTALVPLSRLQVGKKYNVRFDVSLK 261
           PR L++IWG + RYW++P KN    AEL+QVCWLEV+  VP+    +G K+ + F VS K
Sbjct: 218 PRQLNVIWGGNLRYWKMPEKNSGSPAELLQVCWLEVSGSVPIRSASIGTKFRITFQVSFK 277

Query: 262 ADAFGWNKQTPLYLAAK 312
           +DAFGWN   P+Y+ AK
Sbjct: 278 SDAFGWN-NCPVYVMAK 293


>emb|CBI27174.3| unnamed protein product [Vitis vinifera]
          Length = 167

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 40/77 (51%), Positives = 54/77 (70%)
 Frame = +1

Query: 82  PRGLDIIWGNDKRYWRIPTKNDNGSAELIQVCWLEVTALVPLSRLQVGKKYNVRFDVSLK 261
           PR L++ WG D RYW++P K  N  AEL++VCWLEV+  VP+  +  G KY + F +SLK
Sbjct: 21  PRQLNVSWGRDSRYWKMPGKGSNRPAELLRVCWLEVSGSVPIGSVPPGTKYRITFQISLK 80

Query: 262 ADAFGWNKQTPLYLAAK 312
           +DAFGWN   P+Y+ AK
Sbjct: 81  SDAFGWN-DCPVYVMAK 96


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