BLASTX nr result

ID: Coptis24_contig00034917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034917
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313782.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_002512942.1| Sec14 cytosolic factor, putative [Ricinus co...   117   1e-24
ref|XP_002305440.1| predicted protein [Populus trichocarpa] gi|2...   115   3e-24
ref|XP_002280238.2| PREDICTED: uncharacterized protein LOC100245...   110   2e-22
emb|CAN82580.1| hypothetical protein VITISV_008779 [Vitis vinifera]   110   2e-22

>ref|XP_002313782.1| predicted protein [Populus trichocarpa] gi|222850190|gb|EEE87737.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/72 (83%), Positives = 68/72 (94%)
 Frame = +2

Query: 272 ADVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMSVTIEDEHDAEELQAVD 451
           +D E+SEDER+TK+GS KKKAI+AS KFRNSLTKKGRRHSRVMS++IED+ DAEELQAVD
Sbjct: 4   SDTEHSEDERKTKLGSLKKKAISASNKFRNSLTKKGRRHSRVMSISIEDDLDAEELQAVD 63

Query: 452 AFRQALILDELL 487
           AFRQALILDELL
Sbjct: 64  AFRQALILDELL 75


>ref|XP_002512942.1| Sec14 cytosolic factor, putative [Ricinus communis]
           gi|223547953|gb|EEF49445.1| Sec14 cytosolic factor,
           putative [Ricinus communis]
          Length = 555

 Score =  117 bits (293), Expect = 1e-24
 Identities = 61/83 (73%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
 Frame = +2

Query: 245 LDRASRPGP--ADVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMSVTIED 418
           LDR  + GP  +D +N EDER+T++ + KKKAINAS KFRNSLTKKGRRHSRVMSV IED
Sbjct: 11  LDRHIKAGPEKSDTDNVEDERKTRLAALKKKAINASNKFRNSLTKKGRRHSRVMSVAIED 70

Query: 419 EHDAEELQAVDAFRQALILDELL 487
           + +AEELQAVDAFRQ LILDELL
Sbjct: 71  DINAEELQAVDAFRQVLILDELL 93


>ref|XP_002305440.1| predicted protein [Populus trichocarpa] gi|222848404|gb|EEE85951.1|
           predicted protein [Populus trichocarpa]
          Length = 597

 Score =  115 bits (289), Expect = 3e-24
 Identities = 62/88 (70%), Positives = 72/88 (81%), Gaps = 2/88 (2%)
 Frame = +2

Query: 230 TIMTDLDRASRPG--PADVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMS 403
           T+   LDR  + G   +D E SED+R+TK+GS KKKAI+AS KFRNSLTK+GRRHSRVMS
Sbjct: 41  TMSGPLDRDIKGGLEKSDAEYSEDDRKTKLGSLKKKAISASNKFRNSLTKRGRRHSRVMS 100

Query: 404 VTIEDEHDAEELQAVDAFRQALILDELL 487
           + IED  +AEELQAVDAFRQALILDELL
Sbjct: 101 IAIEDNLNAEELQAVDAFRQALILDELL 128


>ref|XP_002280238.2| PREDICTED: uncharacterized protein LOC100245225, partial [Vitis
           vinifera]
          Length = 619

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/73 (75%), Positives = 68/73 (93%), Gaps = 1/73 (1%)
 Frame = +2

Query: 272 ADVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMSVTI-EDEHDAEELQAV 448
           +D+ENSEDER+ K+G+FKKKAI AS+KFRNSLTKKGRR+S+VM++ + ED+ DAEELQAV
Sbjct: 6   SDIENSEDERKKKMGTFKKKAITASSKFRNSLTKKGRRNSKVMNIAVEEDDLDAEELQAV 65

Query: 449 DAFRQALILDELL 487
           DAFRQALIL+ELL
Sbjct: 66  DAFRQALILEELL 78


>emb|CAN82580.1| hypothetical protein VITISV_008779 [Vitis vinifera]
          Length = 637

 Score =  110 bits (274), Expect = 2e-22
 Identities = 55/73 (75%), Positives = 68/73 (93%), Gaps = 1/73 (1%)
 Frame = +2

Query: 272 ADVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMSVTI-EDEHDAEELQAV 448
           +D+ENSEDER+ K+G+FKKKAI AS+KFRNSLTKKGRR+S+VM++ + ED+ DAEELQAV
Sbjct: 28  SDIENSEDERKKKMGTFKKKAITASSKFRNSLTKKGRRNSKVMNIAVEEDDLDAEELQAV 87

Query: 449 DAFRQALILDELL 487
           DAFRQALIL+ELL
Sbjct: 88  DAFRQALILEELL 100


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