BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034911
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [...   149   3e-34
ref|XP_002320934.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_002301554.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. glo...   144   6e-33
ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [...   143   1e-32

>ref|XP_002273855.2| PREDICTED: probable polygalacturonase-like [Vitis vinifera]
           gi|297744085|emb|CBI37055.3| unnamed protein product
           [Vitis vinifera]
          Length = 466

 Score =  149 bits (375), Expect = 3e-34
 Identities = 73/101 (72%), Positives = 80/101 (79%)
 Frame = -3

Query: 303 DSSDDVCIEDCYISTGDDIIAIKSGWDEYGISYARPSSNITXXXXXXXXXXXXXXXXGSE 124
           DSS+DVCIEDCYISTGDD+IAIKSGWDEYGISYARPS+NI                 GSE
Sbjct: 235 DSSNDVCIEDCYISTGDDLIAIKSGWDEYGISYARPSTNIIIRRLVGKTNSSAGIAIGSE 294

Query: 123 MSGGVSIVHAEDLQFFNSSNGIRIKTAPGRGGYIRNVYISN 1
           MSGGVS VHAE LQFFNS  GIRIKT+PGRGGY+RN+YIS+
Sbjct: 295 MSGGVSEVHAESLQFFNSKTGIRIKTSPGRGGYVRNIYISD 335


>ref|XP_002320934.1| predicted protein [Populus trichocarpa] gi|222861707|gb|EEE99249.1|
           predicted protein [Populus trichocarpa]
          Length = 427

 Score =  147 bits (372), Expect = 7e-34
 Identities = 75/101 (74%), Positives = 80/101 (79%)
 Frame = -3

Query: 303 DSSDDVCIEDCYISTGDDIIAIKSGWDEYGISYARPSSNITXXXXXXXXXXXXXXXXGSE 124
           DSSDDVCIEDCYISTGDDIIAIKSGWDEYG SYARPS NIT                GSE
Sbjct: 228 DSSDDVCIEDCYISTGDDIIAIKSGWDEYGTSYARPSKNIT-IRGLVGQTTSAGIAIGSE 286

Query: 123 MSGGVSIVHAEDLQFFNSSNGIRIKTAPGRGGYIRNVYISN 1
           MSGGVS VHAE+L F+NS+ GIRIKTAPGRGGY+RN+YISN
Sbjct: 287 MSGGVSEVHAENLTFYNSTTGIRIKTAPGRGGYVRNIYISN 327


>ref|XP_002301554.1| predicted protein [Populus trichocarpa] gi|222843280|gb|EEE80827.1|
           predicted protein [Populus trichocarpa]
          Length = 458

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/101 (70%), Positives = 81/101 (80%)
 Frame = -3

Query: 303 DSSDDVCIEDCYISTGDDIIAIKSGWDEYGISYARPSSNITXXXXXXXXXXXXXXXXGSE 124
           DSSDDVC+EDCY+STGDDIIAIKSGWDEYG+SY RPS NIT                GSE
Sbjct: 235 DSSDDVCVEDCYVSTGDDIIAIKSGWDEYGMSYGRPSKNIT-IRRLVGQTTSAGIAIGSE 293

Query: 123 MSGGVSIVHAEDLQFFNSSNGIRIKTAPGRGGYIRNVYISN 1
           MSGGVS VHAE+L+F+NS+ GIRIKT+PGRGGY+RN+YISN
Sbjct: 294 MSGGVSEVHAENLRFYNSTTGIRIKTSPGRGGYVRNIYISN 334


>gb|ABG34278.1| polygalacturonase [Eucalyptus globulus subsp. globulus]
          Length = 307

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/101 (71%), Positives = 79/101 (78%)
 Frame = -3

Query: 303 DSSDDVCIEDCYISTGDDIIAIKSGWDEYGISYARPSSNITXXXXXXXXXXXXXXXXGSE 124
           DSSDDVCIEDCYISTGDD+IAIKSGWDEYGISY RPS NI                 GSE
Sbjct: 74  DSSDDVCIEDCYISTGDDVIAIKSGWDEYGISYGRPSKNI-IIRRLIGETHSSGIAIGSE 132

Query: 123 MSGGVSIVHAEDLQFFNSSNGIRIKTAPGRGGYIRNVYISN 1
           MSGGVS VHAED+ FFNS+ GIRIKT+PGRGGY+RN++ISN
Sbjct: 133 MSGGVSDVHAEDIVFFNSTTGIRIKTSPGRGGYVRNIFISN 173


>ref|XP_003554577.1| PREDICTED: probable polygalacturonase-like [Glycine max]
          Length = 467

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/101 (69%), Positives = 81/101 (80%)
 Frame = -3

Query: 303 DSSDDVCIEDCYISTGDDIIAIKSGWDEYGISYARPSSNITXXXXXXXXXXXXXXXXGSE 124
           DSSD+VCIEDCYISTGDD+IAIKSGWDEYGI+Y RPS+NI                 GSE
Sbjct: 235 DSSDNVCIEDCYISTGDDLIAIKSGWDEYGIAYGRPSTNI-IIHRLVGKTQTSGIAIGSE 293

Query: 123 MSGGVSIVHAEDLQFFNSSNGIRIKTAPGRGGYIRNVYISN 1
           MSGGVS VHAED+QF++S NGIRIKT+PGRGGY+RN+Y+SN
Sbjct: 294 MSGGVSEVHAEDIQFYDSYNGIRIKTSPGRGGYVRNIYVSN 334