BLASTX nr result

ID: Coptis24_contig00034907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034907
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336448.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_002336448.1| predicted protein [Populus trichocarpa] gi|222835041|gb|EEE73490.1|
           predicted protein [Populus trichocarpa]
          Length = 356

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
 Frame = +2

Query: 59  GMFAYTGGGDLLSILFQELKAT--AIRLSL--CIAHDYKRIIVNSDSLRAIHILRDIDTS 226
           G+F+ + G  +L     ELKA   AI LS   C  H +K II+  DS   I  + +    
Sbjct: 248 GIFSLSVG--ILDSNVAELKAVVKAIELSASNCRLH-HKHIIIECDSATVIRWMNNPHNR 304

Query: 227 PWPCWNLVATIRKLLLCFNEVSLLHVFQEENRGADHLAKLSLGESMEHYV 376
           PW   NL ++I++L  CF  ++  H F+E N  ADH+AK  +  + E  V
Sbjct: 305 PWLHHNLFSSIQRLASCFGSLTFTHSFRESNHMADHMAKQGVFRNTEFVV 354


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