BLASTX nr result

ID: Coptis24_contig00034891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034891
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251...    77   2e-12
emb|CBI25573.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
dbj|BAK00222.1| predicted protein [Hordeum vulgare subsp. vulgare]     70   2e-10
ref|XP_002270754.1| PREDICTED: uncharacterized membrane protein ...    70   2e-10

>ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251745 [Vitis vinifera]
          Length = 573

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
 Frame = -1

Query: 337 YAATSLLRID*GVQFSVVIQTSTSALFG*KNFNVIYNFMLLGNFLGVLSFHV-------- 182
           YAAT+LL I  GVQFS+++ T  S LFG K+F + YNFM LGN LG   F          
Sbjct: 445 YAATALLGICYGVQFSIMVPT-VSELFGLKHFGIFYNFMSLGNPLGAFLFSGLLAGFVYD 503

Query: 181 -GTCKELRIKTARTCVSCLGPN*SRLTFVVQHGLCVLGLLLRVI 53
               K+  +    + VSCLGPN  RLTF+V  G+C +G +L +I
Sbjct: 504 NEAAKQQGMNLLNSSVSCLGPNCFRLTFLVLAGVCGVGSILSII 547


>emb|CBI25573.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 9/104 (8%)
 Frame = -1

Query: 337 YAATSLLRID*GVQFSVVIQTSTSALFG*KNFNVIYNFMLLGNFLGVLSFHV-------- 182
           YAAT+LL I  GVQFS+++ T  S LFG K+F + YNFM LGN LG   F          
Sbjct: 384 YAATALLGICYGVQFSIMVPT-VSELFGLKHFGIFYNFMSLGNPLGAFLFSGLLAGFVYD 442

Query: 181 -GTCKELRIKTARTCVSCLGPN*SRLTFVVQHGLCVLGLLLRVI 53
               K+  +    + VSCLGPN  RLTF+V  G+C +G +L +I
Sbjct: 443 NEAAKQQGMNLLNSSVSCLGPNCFRLTFLVLAGVCGVGSILSII 486


>ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|222872939|gb|EEF10070.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 10/105 (9%)
 Frame = -1

Query: 337 YAATSLLRID*GVQFSVVIQTSTSALFG*KNFNVIYNFMLLGNFLGVLSF---------- 188
           YAAT+LL I  GVQFS++I T  S LFG K+F + YNFM LGN LG   F          
Sbjct: 444 YAATALLGICYGVQFSIMIPT-VSELFGLKHFGLFYNFMSLGNPLGAFLFSGLLAGYVYD 502

Query: 187 HVGTCKELRIKTARTCVSCLGPN*SRLTFVVQHGLCVLGLLLRVI 53
           +    +++    + + +SCLGPN  RLTF+V  G C LG +L +I
Sbjct: 503 NEAAKQQVPNLLSNSSISCLGPNCFRLTFLVLAGACGLGSILSII 547


>dbj|BAK00222.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 563

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 46/105 (43%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
 Frame = -1

Query: 346 TAFYAATSLLRID*GVQFSVVIQTSTSALFG*KNFNVIYNFMLLGNFLGVLSFH--VGTC 173
           +  Y A +LL I  G+QFSV+I  S S LFG K+F  IYNF+ LGN LG L F+   G  
Sbjct: 434 STLYVAVALLGICYGIQFSVMISAS-SELFGLKHFGKIYNFISLGNPLGALLFNSLAGYF 492

Query: 172 KELRIK-----TARTCVSCLGPN*SRLTFVVQHGLCVLGLLLRVI 53
            +L ++     T    V+C GPN  RLTF +  G+  LG LL ++
Sbjct: 493 YDLEVEKQHATTTDFDVACHGPNCFRLTFFILSGMACLGTLLSIV 537


>ref|XP_002270754.1| PREDICTED: uncharacterized membrane protein YMR155W [Vitis
           vinifera] gi|297743570|emb|CBI36437.3| unnamed protein
           product [Vitis vinifera]
          Length = 564

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 45/98 (45%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
 Frame = -1

Query: 337 YAATSLLRID*GVQFSVVIQTSTSALFG*KNFNVIYNFMLLGNFLGVLSFH---VGTCKE 167
           YA+T+LL I  GVQFS+++  + S LFG K+F VIYNFMLLGN +G L F     G   +
Sbjct: 442 YASTALLGICYGVQFSIMVPCA-SELFGLKHFGVIYNFMLLGNPIGALLFSGLLAGYVYD 500

Query: 166 LRIKTARTCVSCLGPN*SRLTFVVQHGLCVLGLLLRVI 53
                 ++  +CLG    RLTF+V  G C LG +L +I
Sbjct: 501 FEAAKQQSS-TCLGGTCFRLTFLVLAGACGLGTILSII 537


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