BLASTX nr result
ID: Coptis24_contig00034891
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034891 (367 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251... 77 2e-12 emb|CBI25573.3| unnamed protein product [Vitis vinifera] 77 2e-12 ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|2... 75 7e-12 dbj|BAK00222.1| predicted protein [Hordeum vulgare subsp. vulgare] 70 2e-10 ref|XP_002270754.1| PREDICTED: uncharacterized membrane protein ... 70 2e-10 >ref|XP_002268798.2| PREDICTED: uncharacterized protein LOC100251745 [Vitis vinifera] Length = 573 Score = 76.6 bits (187), Expect = 2e-12 Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 9/104 (8%) Frame = -1 Query: 337 YAATSLLRID*GVQFSVVIQTSTSALFG*KNFNVIYNFMLLGNFLGVLSFHV-------- 182 YAAT+LL I GVQFS+++ T S LFG K+F + YNFM LGN LG F Sbjct: 445 YAATALLGICYGVQFSIMVPT-VSELFGLKHFGIFYNFMSLGNPLGAFLFSGLLAGFVYD 503 Query: 181 -GTCKELRIKTARTCVSCLGPN*SRLTFVVQHGLCVLGLLLRVI 53 K+ + + VSCLGPN RLTF+V G+C +G +L +I Sbjct: 504 NEAAKQQGMNLLNSSVSCLGPNCFRLTFLVLAGVCGVGSILSII 547 >emb|CBI25573.3| unnamed protein product [Vitis vinifera] Length = 512 Score = 76.6 bits (187), Expect = 2e-12 Identities = 47/104 (45%), Positives = 61/104 (58%), Gaps = 9/104 (8%) Frame = -1 Query: 337 YAATSLLRID*GVQFSVVIQTSTSALFG*KNFNVIYNFMLLGNFLGVLSFHV-------- 182 YAAT+LL I GVQFS+++ T S LFG K+F + YNFM LGN LG F Sbjct: 384 YAATALLGICYGVQFSIMVPT-VSELFGLKHFGIFYNFMSLGNPLGAFLFSGLLAGFVYD 442 Query: 181 -GTCKELRIKTARTCVSCLGPN*SRLTFVVQHGLCVLGLLLRVI 53 K+ + + VSCLGPN RLTF+V G+C +G +L +I Sbjct: 443 NEAAKQQGMNLLNSSVSCLGPNCFRLTFLVLAGVCGVGSILSII 486 >ref|XP_002331009.1| predicted protein [Populus trichocarpa] gi|222872939|gb|EEF10070.1| predicted protein [Populus trichocarpa] Length = 580 Score = 74.7 bits (182), Expect = 7e-12 Identities = 47/105 (44%), Positives = 62/105 (59%), Gaps = 10/105 (9%) Frame = -1 Query: 337 YAATSLLRID*GVQFSVVIQTSTSALFG*KNFNVIYNFMLLGNFLGVLSF---------- 188 YAAT+LL I GVQFS++I T S LFG K+F + YNFM LGN LG F Sbjct: 444 YAATALLGICYGVQFSIMIPT-VSELFGLKHFGLFYNFMSLGNPLGAFLFSGLLAGYVYD 502 Query: 187 HVGTCKELRIKTARTCVSCLGPN*SRLTFVVQHGLCVLGLLLRVI 53 + +++ + + +SCLGPN RLTF+V G C LG +L +I Sbjct: 503 NEAAKQQVPNLLSNSSISCLGPNCFRLTFLVLAGACGLGSILSII 547 >dbj|BAK00222.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 563 Score = 70.1 bits (170), Expect = 2e-10 Identities = 46/105 (43%), Positives = 61/105 (58%), Gaps = 7/105 (6%) Frame = -1 Query: 346 TAFYAATSLLRID*GVQFSVVIQTSTSALFG*KNFNVIYNFMLLGNFLGVLSFH--VGTC 173 + Y A +LL I G+QFSV+I S S LFG K+F IYNF+ LGN LG L F+ G Sbjct: 434 STLYVAVALLGICYGIQFSVMISAS-SELFGLKHFGKIYNFISLGNPLGALLFNSLAGYF 492 Query: 172 KELRIK-----TARTCVSCLGPN*SRLTFVVQHGLCVLGLLLRVI 53 +L ++ T V+C GPN RLTF + G+ LG LL ++ Sbjct: 493 YDLEVEKQHATTTDFDVACHGPNCFRLTFFILSGMACLGTLLSIV 537 >ref|XP_002270754.1| PREDICTED: uncharacterized membrane protein YMR155W [Vitis vinifera] gi|297743570|emb|CBI36437.3| unnamed protein product [Vitis vinifera] Length = 564 Score = 69.7 bits (169), Expect = 2e-10 Identities = 45/98 (45%), Positives = 60/98 (61%), Gaps = 3/98 (3%) Frame = -1 Query: 337 YAATSLLRID*GVQFSVVIQTSTSALFG*KNFNVIYNFMLLGNFLGVLSFH---VGTCKE 167 YA+T+LL I GVQFS+++ + S LFG K+F VIYNFMLLGN +G L F G + Sbjct: 442 YASTALLGICYGVQFSIMVPCA-SELFGLKHFGVIYNFMLLGNPIGALLFSGLLAGYVYD 500 Query: 166 LRIKTARTCVSCLGPN*SRLTFVVQHGLCVLGLLLRVI 53 ++ +CLG RLTF+V G C LG +L +I Sbjct: 501 FEAAKQQSS-TCLGGTCFRLTFLVLAGACGLGTILSII 537