BLASTX nr result

ID: Coptis24_contig00034884 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034884
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003596842.1| Capsanthin/capsorubin synthase, chromoplast ...   160   1e-37
gb|ACJ66629.1| lycopene beta-cyclase [Actinidia deliciosa]            157   7e-37
gb|ACJ66628.1| lycopene beta-cyclase [Actinidia chinensis]            157   7e-37
ref|NP_001234445.1| chromoplast-specific lycopene beta-cyclase [...   154   7e-36
gb|ADZ24717.1| lycopene b-cyclase [Solanum pennellii]                 154   9e-36

>ref|XP_003596842.1| Capsanthin/capsorubin synthase, chromoplast [Medicago truncatula]
           gi|355485890|gb|AES67093.1| Capsanthin/capsorubin
           synthase, chromoplast [Medicago truncatula]
          Length = 502

 Score =  160 bits (404), Expect = 1e-37
 Identities = 65/86 (75%), Positives = 82/86 (95%)
 Frame = +2

Query: 2   RSKYDVIIIGSGPAGLRLAESISIYGIRVCCIDPSPLSMWPNNYGVWVDEFQSLGLESCI 181
           RS++DVII+G+GPAG+RLAE +S+YGI+VCC+DP+PLSMWPNNYGVW+DEF+ LGLE C+
Sbjct: 78  RSQFDVIIVGAGPAGIRLAEQVSLYGIKVCCVDPNPLSMWPNNYGVWLDEFEGLGLEDCL 137

Query: 182 DKSWPMAAVYIDDNKTRYLDRPYGRV 259
           DK+WPMA++YIDDNKT+YLDR YGRV
Sbjct: 138 DKTWPMASIYIDDNKTKYLDRCYGRV 163


>gb|ACJ66629.1| lycopene beta-cyclase [Actinidia deliciosa]
          Length = 443

 Score =  157 bits (398), Expect = 7e-37
 Identities = 68/86 (79%), Positives = 81/86 (94%)
 Frame = +2

Query: 2   RSKYDVIIIGSGPAGLRLAESISIYGIRVCCIDPSPLSMWPNNYGVWVDEFQSLGLESCI 181
           RS++DVIIIG+GPAGLRLAE +S YGI+VCC+DPSPLSMWPNNYGVWVDEF+SLGLE C+
Sbjct: 24  RSRFDVIIIGTGPAGLRLAERVSRYGIKVCCVDPSPLSMWPNNYGVWVDEFESLGLEDCL 83

Query: 182 DKSWPMAAVYIDDNKTRYLDRPYGRV 259
           DK+WP+A V I+D+KT+YLDRPYGRV
Sbjct: 84  DKTWPVARVSINDHKTKYLDRPYGRV 109


>gb|ACJ66628.1| lycopene beta-cyclase [Actinidia chinensis]
          Length = 493

 Score =  157 bits (398), Expect = 7e-37
 Identities = 68/86 (79%), Positives = 81/86 (94%)
 Frame = +2

Query: 2   RSKYDVIIIGSGPAGLRLAESISIYGIRVCCIDPSPLSMWPNNYGVWVDEFQSLGLESCI 181
           RS++DVIIIG+GPAGLRLAE +S YGI+VCC+DPSPLSMWPNNYGVWVDEF+SLGLE C+
Sbjct: 74  RSRFDVIIIGTGPAGLRLAERVSRYGIKVCCVDPSPLSMWPNNYGVWVDEFESLGLEDCL 133

Query: 182 DKSWPMAAVYIDDNKTRYLDRPYGRV 259
           DK+WP+A V I+D+KT+YLDRPYGRV
Sbjct: 134 DKTWPVARVSINDHKTKYLDRPYGRV 159


>ref|NP_001234445.1| chromoplast-specific lycopene beta-cyclase [Solanum lycopersicum]
           gi|10644119|gb|AAG21133.1| chromoplast-specific lycopene
           beta-cyclase [Solanum lycopersicum]
          Length = 498

 Score =  154 bits (389), Expect = 7e-36
 Identities = 65/86 (75%), Positives = 79/86 (91%)
 Frame = +2

Query: 2   RSKYDVIIIGSGPAGLRLAESISIYGIRVCCIDPSPLSMWPNNYGVWVDEFQSLGLESCI 181
           R+++DVIIIG+GPAGLRLAE +S YGI+VCC+DPSPLSMWPNNYGVWVDEF++LGLE+C+
Sbjct: 79  RAQFDVIIIGAGPAGLRLAEQVSKYGIKVCCVDPSPLSMWPNNYGVWVDEFENLGLENCL 138

Query: 182 DKSWPMAAVYIDDNKTRYLDRPYGRV 259
           D  WPM  V+I+DNKT+YL RPYGRV
Sbjct: 139 DHKWPMTCVHINDNKTKYLGRPYGRV 164


>gb|ADZ24717.1| lycopene b-cyclase [Solanum pennellii]
          Length = 498

 Score =  154 bits (388), Expect = 9e-36
 Identities = 65/86 (75%), Positives = 78/86 (90%)
 Frame = +2

Query: 2   RSKYDVIIIGSGPAGLRLAESISIYGIRVCCIDPSPLSMWPNNYGVWVDEFQSLGLESCI 181
           R+++DVIIIG+GPAGLRLAE +S YGI+VCC+DPSPLSMWPNNYGVWVDEF++LGLE C+
Sbjct: 79  RAQFDVIIIGAGPAGLRLAEQVSKYGIKVCCVDPSPLSMWPNNYGVWVDEFENLGLEDCL 138

Query: 182 DKSWPMAAVYIDDNKTRYLDRPYGRV 259
           D  WPM  V+I+DNKT+YL RPYGRV
Sbjct: 139 DHKWPMTCVHINDNKTKYLGRPYGRV 164


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