BLASTX nr result
ID: Coptis24_contig00034876
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034876 (609 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AFB18639.1| CESA9 [Gossypium hirsutum] 124 2e-26 ref|XP_002265955.1| PREDICTED: cellulose synthase A catalytic su... 120 2e-25 ref|XP_002871389.1| hypothetical protein ARALYDRAFT_908936 [Arab... 120 2e-25 gb|AFB18634.1| CESA5 [Gossypium hirsutum] 119 5e-25 gb|ACS88358.1| cellulose synthase catalytic subunit [Gossypium h... 119 5e-25 >gb|AFB18639.1| CESA9 [Gossypium hirsutum] Length = 1090 Score = 124 bits (310), Expect = 2e-26 Identities = 55/70 (78%), Positives = 65/70 (92%) Frame = -3 Query: 607 LFGRLFFAFWVIVHLNPFLRGLMGKQDRLPSIVLVWSILLASIASLMWARINPFLAKSDI 428 LFGRLFFAFWVIVHL PFL+GLMGKQDRLP+I++VWSILLASI SL+WAR+NPF++K I Sbjct: 1021 LFGRLFFAFWVIVHLYPFLKGLMGKQDRLPTIIVVWSILLASIFSLLWARVNPFISKGGI 1080 Query: 427 ILEECGLDCD 398 +LE CGL+CD Sbjct: 1081 VLEVCGLNCD 1090 >ref|XP_002265955.1| PREDICTED: cellulose synthase A catalytic subunit 6 [UDP-forming] [Vitis vinifera] Length = 1096 Score = 120 bits (301), Expect = 2e-25 Identities = 53/70 (75%), Positives = 63/70 (90%) Frame = -3 Query: 607 LFGRLFFAFWVIVHLNPFLRGLMGKQDRLPSIVLVWSILLASIASLMWARINPFLAKSDI 428 LFG+LFFA WVIVHL PFL+GLMGKQDRLP+I++VWSILLASI SL+W R+NPF++K I Sbjct: 1027 LFGKLFFALWVIVHLYPFLKGLMGKQDRLPTIIVVWSILLASIFSLLWVRVNPFVSKGGI 1086 Query: 427 ILEECGLDCD 398 +LE CGLDCD Sbjct: 1087 VLEVCGLDCD 1096 >ref|XP_002871389.1| hypothetical protein ARALYDRAFT_908936 [Arabidopsis lyrata subsp. lyrata] gi|297317226|gb|EFH47648.1| hypothetical protein ARALYDRAFT_908936 [Arabidopsis lyrata subsp. lyrata] Length = 1069 Score = 120 bits (300), Expect = 2e-25 Identities = 53/69 (76%), Positives = 63/69 (91%) Frame = -3 Query: 607 LFGRLFFAFWVIVHLNPFLRGLMGKQDRLPSIVLVWSILLASIASLMWARINPFLAKSDI 428 LFGRLFFAFWVI+HL PFL+GL+GKQDR+P+I+LVWSILLASI +L+W R+NPF+AK D Sbjct: 1000 LFGRLFFAFWVILHLYPFLKGLLGKQDRMPTIILVWSILLASILTLLWVRVNPFVAKGDP 1059 Query: 427 ILEECGLDC 401 ILE CGLDC Sbjct: 1060 ILEICGLDC 1068 >gb|AFB18634.1| CESA5 [Gossypium hirsutum] Length = 1095 Score = 119 bits (297), Expect = 5e-25 Identities = 52/70 (74%), Positives = 63/70 (90%) Frame = -3 Query: 607 LFGRLFFAFWVIVHLNPFLRGLMGKQDRLPSIVLVWSILLASIASLMWARINPFLAKSDI 428 LFGRLFFAFWVI+HL PFL+GL+GKQDR+P+I+LVWSILLASI +LMW RINPF++K Sbjct: 1025 LFGRLFFAFWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMWVRINPFVSKDGP 1084 Query: 427 ILEECGLDCD 398 +LE CGL+CD Sbjct: 1085 VLEVCGLNCD 1094 >gb|ACS88358.1| cellulose synthase catalytic subunit [Gossypium hirsutum] Length = 598 Score = 119 bits (297), Expect = 5e-25 Identities = 52/70 (74%), Positives = 63/70 (90%) Frame = -3 Query: 607 LFGRLFFAFWVIVHLNPFLRGLMGKQDRLPSIVLVWSILLASIASLMWARINPFLAKSDI 428 LFGRLFFAFWVI+HL PFL+GL+GKQDR+P+I+LVWSILLASI +LMW RINPF++K Sbjct: 528 LFGRLFFAFWVIIHLYPFLKGLLGKQDRMPTIILVWSILLASILTLMWVRINPFVSKDGP 587 Query: 427 ILEECGLDCD 398 +LE CGL+CD Sbjct: 588 VLEVCGLNCD 597