BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034872
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containi...   107   1e-21
emb|CBI30973.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002521729.1| pentatricopeptide repeat-containing protein,...    94   1e-17

>ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  107 bits (266), Expect = 1e-21
 Identities = 45/77 (58%), Positives = 61/77 (79%)
 Frame = +3

Query: 3   ISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGI 182
           IS FC QGK+ +ALKL+E+MVG+GC P +GSYSP++D LC +GDFQ+A  L   M EK I
Sbjct: 586 ISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDI 645

Query: 183 IPDLFTWHTILVCLTQQ 233
           +PD  TW+++L+CLTQ+
Sbjct: 646 LPDYSTWNSMLLCLTQE 662


>emb|CBI30973.3| unnamed protein product [Vitis vinifera]
          Length = 722

 Score =  107 bits (266), Expect = 1e-21
 Identities = 45/77 (58%), Positives = 61/77 (79%)
 Frame = +3

Query: 3   ISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGI 182
           IS FC QGK+ +ALKL+E+MVG+GC P +GSYSP++D LC +GDFQ+A  L   M EK I
Sbjct: 434 ISAFCGQGKVGSALKLMEDMVGRGCLPDMGSYSPMVDALCNKGDFQKAVRLFLQMVEKDI 493

Query: 183 IPDLFTWHTILVCLTQQ 233
           +PD  TW+++L+CLTQ+
Sbjct: 494 LPDYSTWNSMLLCLTQE 510


>ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 39/79 (49%), Positives = 59/79 (74%)
 Frame = +3

Query: 3   ISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGI 182
           I+ FC QGK+ +ALKL+E++  +GC P   +YSPLID LC+ GD Q+A  +   M +KGI
Sbjct: 528 ITGFCRQGKVESALKLVEDITARGCVPNTETYSPLIDVLCRNGDLQKAMQVFMQMVDKGI 587

Query: 183 IPDLFTWHTILVCLTQQKH 239
           +PDLF W+++L+ L+Q++H
Sbjct: 588 LPDLFIWNSLLLSLSQERH 606


>ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|222856668|gb|EEE94215.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 44/77 (57%), Positives = 55/77 (71%)
 Frame = +3

Query: 3   ISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGI 182
           IS FC  GK  +ALKL+E+MVG+GC P  GSYSPLID LC++  FQ+AA LL  M E GI
Sbjct: 507 ISGFCRLGKDGSALKLLEDMVGRGCVPDTGSYSPLIDALCRKKSFQKAASLLLQMVENGI 566

Query: 183 IPDLFTWHTILVCLTQQ 233
            PD   W+++  CL+QQ
Sbjct: 567 TPDYLIWNSLFHCLSQQ 583


>ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539120|gb|EEF40716.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 629

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 40/77 (51%), Positives = 59/77 (76%)
 Frame = +3

Query: 3   ISEFCNQGKINNALKLIEEMVGKGCKPQVGSYSPLIDTLCKRGDFQRAAGLLSTMAEKGI 182
           I  FC QGK  +ALKL+++MVG+GC P  G+YSPLID LC++G+FQ+A  + + M EKGI
Sbjct: 531 IHGFCGQGKDESALKLLDDMVGRGCVPDRGTYSPLIDALCRKGNFQKALSIFNQMIEKGI 590

Query: 183 IPDLFTWHTILVCLTQQ 233
            PD  TW+++L+ L+++
Sbjct: 591 TPDSSTWNSLLIRLSKE 607