BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034850
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-24
emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]   117   1e-24
ref|XP_002879464.1| pentatricopeptide repeat-containing protein ...   110   2e-22
ref|XP_002318942.1| predicted protein [Populus trichocarpa] gi|2...   108   4e-22
ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   107   1e-21

>ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera] gi|302141693|emb|CBI18896.3| unnamed
           protein product [Vitis vinifera]
          Length = 703

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/71 (73%), Positives = 63/71 (88%)
 Frame = +1

Query: 1   WNSMISGLSQNGRGMEALELFEEMRLSGTIPDHVTFVNLLSACSHMGFVETGQGYFKLMV 180
           WN+MISGLSQNG G EALELFEEM+L GT PD+VTFVN+LSACSHMG VE G GYF++M 
Sbjct: 480 WNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMF 539

Query: 181 DDYGLDPKVDH 213
           D++G+DP+V+H
Sbjct: 540 DEFGMDPRVEH 550


>emb|CAN69119.1| hypothetical protein VITISV_031846 [Vitis vinifera]
          Length = 654

 Score =  117 bits (293), Expect = 1e-24
 Identities = 52/71 (73%), Positives = 63/71 (88%)
 Frame = +1

Query: 1   WNSMISGLSQNGRGMEALELFEEMRLSGTIPDHVTFVNLLSACSHMGFVETGQGYFKLMV 180
           WN+MISGLSQNG G EALELFEEM+L GT PD+VTFVN+LSACSHMG VE G GYF++M 
Sbjct: 480 WNAMISGLSQNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMF 539

Query: 181 DDYGLDPKVDH 213
           D++G+DP+V+H
Sbjct: 540 DEFGMDPRVEH 550


>ref|XP_002879464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297325303|gb|EFH55723.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 713

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/71 (71%), Positives = 57/71 (80%)
 Frame = +1

Query: 1   WNSMISGLSQNGRGMEALELFEEMRLSGTIPDHVTFVNLLSACSHMGFVETGQGYFKLMV 180
           WN+MISGLS NG+G EALELFEEM   GT PD VTFVN++SACSH GFVE G  YF +M 
Sbjct: 481 WNAMISGLSHNGQGDEALELFEEMLAEGTEPDDVTFVNIISACSHKGFVERGWSYFHMMS 540

Query: 181 DDYGLDPKVDH 213
           D +GLDPKVDH
Sbjct: 541 DQFGLDPKVDH 551


>ref|XP_002318942.1| predicted protein [Populus trichocarpa] gi|222857318|gb|EEE94865.1|
           predicted protein [Populus trichocarpa]
          Length = 707

 Score =  108 bits (270), Expect = 4e-22
 Identities = 49/71 (69%), Positives = 58/71 (81%)
 Frame = +1

Query: 1   WNSMISGLSQNGRGMEALELFEEMRLSGTIPDHVTFVNLLSACSHMGFVETGQGYFKLMV 180
           WN+MISGLSQNG G EALELFEEMRL GT PDH+TFV +LSACSHMG V+ G  YF +M 
Sbjct: 484 WNAMISGLSQNGHGREALELFEEMRLEGTKPDHITFVTVLSACSHMGIVKRGWAYFNMMF 543

Query: 181 DDYGLDPKVDH 213
           D++ L P+V+H
Sbjct: 544 DEFCLVPRVEH 554


>ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  107 bits (267), Expect = 1e-21
 Identities = 47/71 (66%), Positives = 62/71 (87%)
 Frame = +1

Query: 1   WNSMISGLSQNGRGMEALELFEEMRLSGTIPDHVTFVNLLSACSHMGFVETGQGYFKLMV 180
           WN+MISGLSQNG G++ALELFEE+R   T PD+VTFVN+LSACSHMG VE G+ YF++M+
Sbjct: 485 WNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYFRMML 544

Query: 181 DDYGLDPKVDH 213
           D++G+ P+V+H
Sbjct: 545 DEFGIVPRVEH 555