BLASTX nr result

ID: Coptis24_contig00034838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034838
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315057.1| predicted protein [Populus trichocarpa] gi|2...    97   1e-18
ref|XP_002528748.1| conserved hypothetical protein [Ricinus comm...    96   3e-18
ref|XP_004160572.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    95   7e-18
ref|XP_004136166.1| PREDICTED: uncharacterized protein LOC101222...    95   7e-18
gb|AFK44748.1| unknown [Lotus japonicus]                               94   9e-18

>ref|XP_002315057.1| predicted protein [Populus trichocarpa] gi|222864097|gb|EEF01228.1|
           predicted protein [Populus trichocarpa]
          Length = 322

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 45/67 (67%), Positives = 58/67 (86%), Gaps = 3/67 (4%)
 Frame = -3

Query: 192 IAFNYDFEEETNDN---SPWEGAIVYKRNATVTHLEYCTTLERLGLGKLSTQVSKSRAST 22
           ++ N+D +EE +     SPWEGAI+YKRN++++H+EYCTTLERLGLGKLST++SKSRAS 
Sbjct: 81  VSLNWDDQEEEDAEDMESPWEGAIIYKRNSSISHVEYCTTLERLGLGKLSTEISKSRASV 140

Query: 21  MGLRVTK 1
           MGLRVTK
Sbjct: 141 MGLRVTK 147


>ref|XP_002528748.1| conserved hypothetical protein [Ricinus communis]
           gi|223531842|gb|EEF33660.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 313

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 46/61 (75%), Positives = 54/61 (88%), Gaps = 2/61 (3%)
 Frame = -3

Query: 177 DFEEETNDN--SPWEGAIVYKRNATVTHLEYCTTLERLGLGKLSTQVSKSRASTMGLRVT 4
           D EEE  ++  SPWEGAI+YKRN +V+H+EYCTTLERLGLGK+ST+VSKSRAS MGLRVT
Sbjct: 75  DLEEENPEDMESPWEGAIIYKRNPSVSHIEYCTTLERLGLGKVSTEVSKSRASVMGLRVT 134

Query: 3   K 1
           K
Sbjct: 135 K 135


>ref|XP_004160572.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101222143
           [Cucumis sativus]
          Length = 262

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/63 (73%), Positives = 55/63 (87%), Gaps = 4/63 (6%)
 Frame = -3

Query: 177 DFEEETND----NSPWEGAIVYKRNATVTHLEYCTTLERLGLGKLSTQVSKSRASTMGLR 10
           D+E++  D    +SPWEGAI+YKRN++V+H+EYCTTLERLGL KLST VSKSRASTMGLR
Sbjct: 25  DWEDQEGDIEEMDSPWEGAIIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR 84

Query: 9   VTK 1
           VTK
Sbjct: 85  VTK 87


>ref|XP_004136166.1| PREDICTED: uncharacterized protein LOC101222143 [Cucumis sativus]
          Length = 319

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/63 (73%), Positives = 55/63 (87%), Gaps = 4/63 (6%)
 Frame = -3

Query: 177 DFEEETND----NSPWEGAIVYKRNATVTHLEYCTTLERLGLGKLSTQVSKSRASTMGLR 10
           D+E++  D    +SPWEGAI+YKRN++V+H+EYCTTLERLGL KLST VSKSRASTMGLR
Sbjct: 82  DWEDQEGDIEEMDSPWEGAIIYKRNSSVSHVEYCTTLERLGLEKLSTDVSKSRASTMGLR 141

Query: 9   VTK 1
           VTK
Sbjct: 142 VTK 144


>gb|AFK44748.1| unknown [Lotus japonicus]
          Length = 292

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/65 (69%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
 Frame = -3

Query: 192 IAFNYDFEEETND-NSPWEGAIVYKRNATVTHLEYCTTLERLGLGKLSTQVSKSRASTMG 16
           I+ ++D + E  D  SPWEGA++YKRNA++ HLEYCTTLERLGLG LST VSKSRA+ MG
Sbjct: 77  ISLDWDDDGEIEDAGSPWEGAVIYKRNASILHLEYCTTLERLGLGNLSTDVSKSRAAVMG 136

Query: 15  LRVTK 1
           LRVTK
Sbjct: 137 LRVTK 141


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