BLASTX nr result

ID: Coptis24_contig00034827 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034827
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76603.1| hypothetical protein VITISV_012932 [Vitis vinifera]   106   2e-21
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]   105   5e-21
gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat...   104   8e-21
ref|XP_004161321.1| PREDICTED: uncharacterized protein LOC101223...   103   2e-20
emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera]   103   2e-20

>emb|CAN76603.1| hypothetical protein VITISV_012932 [Vitis vinifera]
          Length = 1027

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/92 (57%), Positives = 65/92 (70%)
 Frame = +2

Query: 137 QSTTILECVRGVL*EFHDVFPTDLPKGLPP*CDIHYHIDLVPGSSLPNRPHYHMSPKDHE 316
           Q    L  VR +L +F D++P +LP  LPP  DI + IDL+PG+SLPN P Y M+P +H 
Sbjct: 245 QDKEYLANVRKILDDFSDLWPGELPNQLPPLRDIQHAIDLIPGASLPNLPTYRMNPTEHA 304

Query: 317 ELKRHVEDLLAKGHIQESLSPCAVPALLTLKK 412
           ELKR V++LL KG I ESLSPC VPALLT KK
Sbjct: 305 ELKRQVDELLTKGFIHESLSPCGVPALLTPKK 336


>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/83 (60%), Positives = 63/83 (75%)
 Frame = +2

Query: 164 RGVL*EFHDVFPTDLPKGLPP*CDIHYHIDLVPGSSLPNRPHYHMSPKDHEELKRHVEDL 343
           R +L +F D++P +LP  LPP  DI + IDL+PG+SLPN P Y M+P +H ELKR V++L
Sbjct: 587 RKILDDFSDLWPVELPNELPPMRDIQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDEL 646

Query: 344 LAKGHIQESLSPCAVPALLTLKK 412
           L KG I+ESLSPC VPALLT KK
Sbjct: 647 LTKGFIRESLSPCGVPALLTPKK 669


>gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas]
          Length = 1358

 Score =  104 bits (259), Expect = 8e-21
 Identities = 54/96 (56%), Positives = 67/96 (69%)
 Frame = +2

Query: 125 LVVSQSTTILECVRGVL*EFHDVFPTDLPKGLPP*CDIHYHIDLVPGSSLPNRPHYHMSP 304
           L V +S  I   V  +L EF DVFP +LPKGLPP   I + IDL+PG+SLPNRP Y  +P
Sbjct: 612 LNVIKSEIIPSDVSALLSEFADVFPEELPKGLPPIRGIEHQIDLIPGASLPNRPAYRTNP 671

Query: 305 KDHEELKRHVEDLLAKGHIQESLSPCAVPALLTLKK 412
            + +E++R V++LL  G IQESLSPCAVP LL  KK
Sbjct: 672 DEAKEIQRQVDELLQAGFIQESLSPCAVPVLLVPKK 707


>ref|XP_004161321.1| PREDICTED: uncharacterized protein LOC101223713 [Cucumis sativus]
          Length = 645

 Score =  103 bits (256), Expect = 2e-20
 Identities = 47/75 (62%), Positives = 60/75 (80%)
 Frame = +2

Query: 188 DVFPTDLPKGLPP*CDIHYHIDLVPGSSLPNRPHYHMSPKDHEELKRHVEDLLAKGHIQE 367
           D+   + P+GLPP  DI +HIDL+PG+SLPN  HY MSP++++ L  H+E+LL KGHI+ 
Sbjct: 443 DLLGLEEPEGLPPLRDIQHHIDLIPGASLPNLAHYRMSPQEYKTLHDHIEELLKKGHIKP 502

Query: 368 SLSPCAVPALLTLKK 412
           SLSPCAVPALLTLKK
Sbjct: 503 SLSPCAVPALLTLKK 517


>emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera]
          Length = 1292

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/84 (59%), Positives = 63/84 (75%)
 Frame = +2

Query: 161 VRGVL*EFHDVFPTDLPKGLPP*CDIHYHIDLVPGSSLPNRPHYHMSPKDHEELKRHVED 340
           VR +L +F D +PT+LP  LPP  D+ + IDL+PG+SLPN P Y M+P +H ELKR V++
Sbjct: 504 VRKILDDFSDFWPTELPNQLPPMRDVQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDE 563

Query: 341 LLAKGHIQESLSPCAVPALLTLKK 412
           LL KG I+ESLSP  VPALLT KK
Sbjct: 564 LLTKGFIRESLSPYGVPALLTPKK 587


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