BLASTX nr result
ID: Coptis24_contig00034827
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034827 (414 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN76603.1| hypothetical protein VITISV_012932 [Vitis vinifera] 106 2e-21 emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 105 5e-21 gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 104 8e-21 ref|XP_004161321.1| PREDICTED: uncharacterized protein LOC101223... 103 2e-20 emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera] 103 2e-20 >emb|CAN76603.1| hypothetical protein VITISV_012932 [Vitis vinifera] Length = 1027 Score = 106 bits (264), Expect = 2e-21 Identities = 53/92 (57%), Positives = 65/92 (70%) Frame = +2 Query: 137 QSTTILECVRGVL*EFHDVFPTDLPKGLPP*CDIHYHIDLVPGSSLPNRPHYHMSPKDHE 316 Q L VR +L +F D++P +LP LPP DI + IDL+PG+SLPN P Y M+P +H Sbjct: 245 QDKEYLANVRKILDDFSDLWPGELPNQLPPLRDIQHAIDLIPGASLPNLPTYRMNPTEHA 304 Query: 317 ELKRHVEDLLAKGHIQESLSPCAVPALLTLKK 412 ELKR V++LL KG I ESLSPC VPALLT KK Sbjct: 305 ELKRQVDELLTKGFIHESLSPCGVPALLTPKK 336 >emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] Length = 1521 Score = 105 bits (261), Expect = 5e-21 Identities = 50/83 (60%), Positives = 63/83 (75%) Frame = +2 Query: 164 RGVL*EFHDVFPTDLPKGLPP*CDIHYHIDLVPGSSLPNRPHYHMSPKDHEELKRHVEDL 343 R +L +F D++P +LP LPP DI + IDL+PG+SLPN P Y M+P +H ELKR V++L Sbjct: 587 RKILDDFSDLWPVELPNELPPMRDIQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDEL 646 Query: 344 LAKGHIQESLSPCAVPALLTLKK 412 L KG I+ESLSPC VPALLT KK Sbjct: 647 LTKGFIRESLSPCGVPALLTPKK 669 >gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas] Length = 1358 Score = 104 bits (259), Expect = 8e-21 Identities = 54/96 (56%), Positives = 67/96 (69%) Frame = +2 Query: 125 LVVSQSTTILECVRGVL*EFHDVFPTDLPKGLPP*CDIHYHIDLVPGSSLPNRPHYHMSP 304 L V +S I V +L EF DVFP +LPKGLPP I + IDL+PG+SLPNRP Y +P Sbjct: 612 LNVIKSEIIPSDVSALLSEFADVFPEELPKGLPPIRGIEHQIDLIPGASLPNRPAYRTNP 671 Query: 305 KDHEELKRHVEDLLAKGHIQESLSPCAVPALLTLKK 412 + +E++R V++LL G IQESLSPCAVP LL KK Sbjct: 672 DEAKEIQRQVDELLQAGFIQESLSPCAVPVLLVPKK 707 >ref|XP_004161321.1| PREDICTED: uncharacterized protein LOC101223713 [Cucumis sativus] Length = 645 Score = 103 bits (256), Expect = 2e-20 Identities = 47/75 (62%), Positives = 60/75 (80%) Frame = +2 Query: 188 DVFPTDLPKGLPP*CDIHYHIDLVPGSSLPNRPHYHMSPKDHEELKRHVEDLLAKGHIQE 367 D+ + P+GLPP DI +HIDL+PG+SLPN HY MSP++++ L H+E+LL KGHI+ Sbjct: 443 DLLGLEEPEGLPPLRDIQHHIDLIPGASLPNLAHYRMSPQEYKTLHDHIEELLKKGHIKP 502 Query: 368 SLSPCAVPALLTLKK 412 SLSPCAVPALLTLKK Sbjct: 503 SLSPCAVPALLTLKK 517 >emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera] Length = 1292 Score = 103 bits (256), Expect = 2e-20 Identities = 50/84 (59%), Positives = 63/84 (75%) Frame = +2 Query: 161 VRGVL*EFHDVFPTDLPKGLPP*CDIHYHIDLVPGSSLPNRPHYHMSPKDHEELKRHVED 340 VR +L +F D +PT+LP LPP D+ + IDL+PG+SLPN P Y M+P +H ELKR V++ Sbjct: 504 VRKILDDFSDFWPTELPNQLPPMRDVQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDE 563 Query: 341 LLAKGHIQESLSPCAVPALLTLKK 412 LL KG I+ESLSP VPALLT KK Sbjct: 564 LLTKGFIRESLSPYGVPALLTPKK 587