BLASTX nr result

ID: Coptis24_contig00034822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034822
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272916.1| PREDICTED: 60S ribosomal protein L7-1 [Vitis...    84   2e-14
gb|ABC01902.1| putative 60S ribosomal protein L7-like protein [S...    82   6e-14
gb|ACF06597.1| 60S ribosomal protein L7-like protein [Elaeis gui...    81   8e-14
gb|EFN51617.1| hypothetical protein CHLNCDRAFT_49213 [Chlorella ...    75   4e-12
ref|XP_002297799.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>ref|XP_002272916.1| PREDICTED: 60S ribosomal protein L7-1 [Vitis vinifera]
           gi|297745096|emb|CBI38935.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 41/86 (47%), Positives = 56/86 (65%)
 Frame = +3

Query: 15  LAYVPEVILKKRKNNDEWAIKRRERXXXXXXXXXXXXXXVFKRAEQFIEEYRTKELDFVN 194
           L Y+PEVILKKRK+N+EWAIKRR++                K AEQ+I+EYR +ELD + 
Sbjct: 9   LTYIPEVILKKRKSNEEWAIKRRQQLEERNLRSKQNKAFNLKTAEQYIQEYRNRELDLIQ 68

Query: 195 MKQRHRWGKSAFSTPESTLVFIIRIR 272
           MK R +  K +  T +S L+F+IRI+
Sbjct: 69  MKHRGKKRKLSLETLDSKLLFVIRIQ 94


>gb|ABC01902.1| putative 60S ribosomal protein L7-like protein [Solanum tuberosum]
          Length = 246

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/86 (53%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
 Frame = +3

Query: 15  LAYVPEVILKKRKNNDEWAIKRRERXXXXXXXXXXXXXXVFKRAEQFIEEYRTKELDFVN 194
           L Y+PEVILKKRKNN+EWAI RR+               V K+ EQFI EYR KE+D V 
Sbjct: 9   LNYIPEVILKKRKNNEEWAI-RRKLQLEQKVRKLKSDSFVIKKPEQFIREYRDKEMDLVQ 67

Query: 195 MKQR-HRWGKSAFSTPESTLVFIIRI 269
           MKQR  R  K A +T +S L+F+IRI
Sbjct: 68  MKQRGKRRAKGALTTSDSKLLFVIRI 93


>gb|ACF06597.1| 60S ribosomal protein L7-like protein [Elaeis guineensis]
          Length = 246

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 41/86 (47%), Positives = 54/86 (62%)
 Frame = +3

Query: 15  LAYVPEVILKKRKNNDEWAIKRRERXXXXXXXXXXXXXXVFKRAEQFIEEYRTKELDFVN 194
           LAYV E +LKKRKNN+EWAIKRR++                +R E+F++EYR KELD + 
Sbjct: 9   LAYVHETVLKKRKNNEEWAIKRRDQLDARKKRKKEDLKLAIRRPEEFVKEYRDKELDLIR 68

Query: 195 MKQRHRWGKSAFSTPESTLVFIIRIR 272
           MKQR +  K      +S L+F+IRIR
Sbjct: 69  MKQRLKRRKLFSDNIKSDLLFVIRIR 94


>gb|EFN51617.1| hypothetical protein CHLNCDRAFT_49213 [Chlorella variabilis]
          Length = 241

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/89 (41%), Positives = 54/89 (60%)
 Frame = +3

Query: 6   MAELAYVPEVILKKRKNNDEWAIKRRERXXXXXXXXXXXXXXVFKRAEQFIEEYRTKELD 185
           MA  A VPE +LKKRK +++WA K+                 +FKRAEQ+++EYRT+ELD
Sbjct: 1   MAPPAAVPESVLKKRKRDEDWATKKAAAAAEAKQKSVATRKEIFKRAEQYVKEYRTQELD 60

Query: 186 FVNMKQRHRWGKSAFSTPESTLVFIIRIR 272
            + +K+  +     +  PE+ LVF+IRIR
Sbjct: 61  LIRLKREAKAKGGFYVEPEAKLVFVIRIR 89


>ref|XP_002297799.1| predicted protein [Populus trichocarpa] gi|222845057|gb|EEE82604.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/86 (46%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
 Frame = +3

Query: 15  LAYVPEVILKKRKNNDEW-AIKRRERXXXXXXXXXXXXXXVFKRAEQFIEEYRTKELDFV 191
           L YVPEVILKKRK+ +E  A+ R+ +                KR EQF+ E+R KELD +
Sbjct: 9   LTYVPEVILKKRKHKEESIALTRKTQLELGQNGGKKRRMDDIKRPEQFVREFRDKELDLI 68

Query: 192 NMKQRHRWGKSAFSTPESTLVFIIRI 269
            MKQR +  KSA S P S L+F+IR+
Sbjct: 69  RMKQRTKRAKSALSIPNSKLLFVIRV 94


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