BLASTX nr result

ID: Coptis24_contig00034821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034821
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...   297   5e-79
gb|ACI28521.1| rice meiotic crossover 1 [Oryza sativa Japonica G...   291   3e-77
ref|NP_001047442.1| Os02g0617500 [Oryza sativa Japonica Group] g...   291   3e-77
ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helica...   291   4e-77
ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helica...   290   6e-77

>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  297 bits (761), Expect = 5e-79
 Identities = 140/170 (82%), Positives = 156/170 (91%)
 Frame = -1

Query: 511  LAHGINLPAHTVVIKSTQYYNKEKGLYTEYERSMILQMCGRAGRPPFDDTGMVVIMTRRE 332
            LAHGINLPAHTVVIKSTQ++NKEKGLY EY+RSMILQMCGRAGRPPF+DTGM +IMTRRE
Sbjct: 1121 LAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSMILQMCGRAGRPPFEDTGMAIIMTRRE 1180

Query: 331  TVHLYENLLSGCEMVESQLLSCVTEHLAAEIVQLTVSDITRAIEWIKCSFLYVRLKKNPE 152
            TVHLYENLL+GCE+VESQLLSCVTEHL AEIVQLTVSDI RAIEW+KCS+LYVR+KKNPE
Sbjct: 1181 TVHLYENLLNGCELVESQLLSCVTEHLTAEIVQLTVSDIARAIEWMKCSYLYVRMKKNPE 1240

Query: 151  NYGVKRKIPGESLEKHMQEICVQKVNELSRHGMIWMDEYGFLLKPLEPGK 2
             Y  K+ IPG  +EK+ Q+ICVQKVNELS+H MIW DE GFLLKPLEPG+
Sbjct: 1241 KYAFKKGIPGNLIEKYTQDICVQKVNELSQHQMIWTDEDGFLLKPLEPGR 1290


>gb|ACI28521.1| rice meiotic crossover 1 [Oryza sativa Japonica Group]
          Length = 1205

 Score =  291 bits (746), Expect = 3e-77
 Identities = 133/170 (78%), Positives = 156/170 (91%)
 Frame = -1

Query: 511 LAHGINLPAHTVVIKSTQYYNKEKGLYTEYERSMILQMCGRAGRPPFDDTGMVVIMTRRE 332
           LAHGINLPAHTVVIKSTQ++NKEKGLY EYERSM+LQMCGRAGRPPFDDTG ++IMTRRE
Sbjct: 377 LAHGINLPAHTVVIKSTQFFNKEKGLYVEYERSMVLQMCGRAGRPPFDDTGTIIIMTRRE 436

Query: 331 TVHLYENLLSGCEMVESQLLSCVTEHLAAEIVQLTVSDITRAIEWIKCSFLYVRLKKNPE 152
           TVHLYENLL+GCEMVESQLL C  EHL AEIVQLTVSDIT AIEW+KCS+LY+R+KKNP+
Sbjct: 437 TVHLYENLLNGCEMVESQLLPCAVEHLNAEIVQLTVSDITLAIEWLKCSYLYIRIKKNPQ 496

Query: 151 NYGVKRKIPGESLEKHMQEICVQKVNELSRHGMIWMDEYGFLLKPLEPGK 2
           +YG+K++IP E LEK M++ICV+K++EL  +G+IW DE GFLLKPLEPG+
Sbjct: 497 HYGIKKEIPRELLEKQMKDICVEKIHELGEYGLIWTDEDGFLLKPLEPGR 546


>ref|NP_001047442.1| Os02g0617500 [Oryza sativa Japonica Group]
           gi|113536973|dbj|BAF09356.1| Os02g0617500, partial
           [Oryza sativa Japonica Group]
          Length = 624

 Score =  291 bits (746), Expect = 3e-77
 Identities = 133/170 (78%), Positives = 156/170 (91%)
 Frame = -1

Query: 511 LAHGINLPAHTVVIKSTQYYNKEKGLYTEYERSMILQMCGRAGRPPFDDTGMVVIMTRRE 332
           LAHGINLPAHTVVIKSTQ++NKEKGLY EYERSM+LQMCGRAGRPPFDDTG ++IMTRRE
Sbjct: 377 LAHGINLPAHTVVIKSTQFFNKEKGLYVEYERSMVLQMCGRAGRPPFDDTGTIIIMTRRE 436

Query: 331 TVHLYENLLSGCEMVESQLLSCVTEHLAAEIVQLTVSDITRAIEWIKCSFLYVRLKKNPE 152
           TVHLYENLL+GCEMVESQLL C  EHL AEIVQLTVSDIT AIEW+KCS+LY+R+KKNP+
Sbjct: 437 TVHLYENLLNGCEMVESQLLPCAVEHLNAEIVQLTVSDITLAIEWLKCSYLYIRIKKNPQ 496

Query: 151 NYGVKRKIPGESLEKHMQEICVQKVNELSRHGMIWMDEYGFLLKPLEPGK 2
           +YG+K++IP E LEK M++ICV+K++EL  +G+IW DE GFLLKPLEPG+
Sbjct: 497 HYGIKKEIPRELLEKQMKDICVEKIHELGEYGLIWTDEDGFLLKPLEPGR 546


>ref|XP_003548572.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Glycine
           max]
          Length = 1195

 Score =  291 bits (745), Expect = 4e-77
 Identities = 136/170 (80%), Positives = 159/170 (93%)
 Frame = -1

Query: 511 LAHGINLPAHTVVIKSTQYYNKEKGLYTEYERSMILQMCGRAGRPPFDDTGMVVIMTRRE 332
           LAHGINLPAHTVVIKSTQ++NKEKGLY EY+RS ILQMCGRAGRPPFDDTGMV+IMTRRE
Sbjct: 370 LAHGINLPAHTVVIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTGMVIIMTRRE 429

Query: 331 TVHLYENLLSGCEMVESQLLSCVTEHLAAEIVQLTVSDITRAIEWIKCSFLYVRLKKNPE 152
           TVHLYENLL+GCE+VESQLLSCVTEHL AEIVQLTVSDIT+AIEW+K S+LYVR+KKNP 
Sbjct: 430 TVHLYENLLNGCEVVESQLLSCVTEHLLAEIVQLTVSDITKAIEWLKRSYLYVRMKKNPM 489

Query: 151 NYGVKRKIPGESLEKHMQEICVQKVNELSRHGMIWMDEYGFLLKPLEPGK 2
           NY +K+ I G+ LEKH+Q+ICV+KVNELS++ M+W+DE GFLL+PL+PG+
Sbjct: 490 NYAIKKGISGDRLEKHVQDICVRKVNELSQNDMVWVDEDGFLLRPLDPGR 539


>ref|XP_004142851.1| PREDICTED: probable ATP-dependent DNA helicase HFM1-like [Cucumis
           sativus] gi|449483903|ref|XP_004156727.1| PREDICTED:
           probable ATP-dependent DNA helicase HFM1-like [Cucumis
           sativus]
          Length = 1189

 Score =  290 bits (743), Expect = 6e-77
 Identities = 130/170 (76%), Positives = 157/170 (92%)
 Frame = -1

Query: 511 LAHGINLPAHTVVIKSTQYYNKEKGLYTEYERSMILQMCGRAGRPPFDDTGMVVIMTRRE 332
           LAHGINLPAHTV+IKSTQ++NKEKGLY EY+RS ILQMCGRAGRPPFDDTG+V+IMTRR+
Sbjct: 445 LAHGINLPAHTVIIKSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTGIVIIMTRRD 504

Query: 331 TVHLYENLLSGCEMVESQLLSCVTEHLAAEIVQLTVSDITRAIEWIKCSFLYVRLKKNPE 152
           TVHLYENLL+GCE+VESQLLSCVTEHL AEIVQ+T+ DI +AIEW+KCS+L+VR+KKNP+
Sbjct: 505 TVHLYENLLNGCEIVESQLLSCVTEHLTAEIVQMTIPDIIKAIEWMKCSYLFVRMKKNPQ 564

Query: 151 NYGVKRKIPGESLEKHMQEICVQKVNELSRHGMIWMDEYGFLLKPLEPGK 2
            Y ++  IP  ++EKHM++IC++KVNELSRH MIWMDE GFLLKPL+PG+
Sbjct: 565 KYAIRNGIPNHNMEKHMEDICIEKVNELSRHQMIWMDEDGFLLKPLDPGR 614


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