BLASTX nr result

ID: Coptis24_contig00034809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034809
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003589097.1| hypothetical protein MTR_1g018440 [Medicago ...    65   7e-09
ref|XP_002510110.1| conserved hypothetical protein [Ricinus comm...    62   5e-08
emb|CBI19416.3| unnamed protein product [Vitis vinifera]               59   5e-07
emb|CBI22469.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002263972.1| PREDICTED: uncharacterized protein LOC100242...    56   3e-06

>ref|XP_003589097.1| hypothetical protein MTR_1g018440 [Medicago truncatula]
           gi|355478145|gb|AES59348.1| hypothetical protein
           MTR_1g018440 [Medicago truncatula]
          Length = 621

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 48/124 (38%), Positives = 63/124 (50%), Gaps = 19/124 (15%)
 Frame = -3

Query: 317 MVAALSSTVTSTDHQTK----RPPLLPSEKDN--VRKPKSRQVTSRYLXXXXXXXXXXXX 156
           MV A+S+T T+ + +      RPPLLPSE DN  VRKPK+R+VTSRY+            
Sbjct: 1   MVTAISTTTTTKNTKRAPTPTRPPLLPSESDNAIVRKPKAREVTSRYMYSSSSSSSFSSP 60

Query: 155 XXXXXXXXSRRFL----------PTPSTPLKRTQSVER---RKLDSKNNGEVSVASKILF 15
                     R +           TP+  +KR+QS ER   R+   + NGE  VA K+LF
Sbjct: 61  PRRTNSPLVNRTVNSTKQKSTPSVTPAAFVKRSQSTERQRQRQGTPRPNGETPVAQKMLF 120

Query: 14  TSTR 3
           TS R
Sbjct: 121 TSAR 124


>ref|XP_002510110.1| conserved hypothetical protein [Ricinus communis]
           gi|223550811|gb|EEF52297.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 629

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 52/129 (40%), Positives = 67/129 (51%), Gaps = 24/129 (18%)
 Frame = -3

Query: 317 MVAALSSTV---TSTDH---QTKRPPLLPSEKDNV----RKPKSRQVTSRYLXXXXXXXX 168
           MVAA+S+T+   T+ +H   +T RPPLLPS+ DN     R+PKSR+VTSRY+        
Sbjct: 1   MVAAVSTTINPKTTANHNSSRTARPPLLPSDPDNAIAPPRRPKSREVTSRYMSSTSSSSS 60

Query: 167 XXXXXXXXXXXXSRRFLP-TPSTP--LKRTQSVERRK--------LDSKNNG---EVSVA 30
                              TPSTP  +KR+ SVERR+         D + NG   EVS  
Sbjct: 61  TPKRSPSPLISRPTAMTTLTPSTPSTIKRSLSVERRRPNTPRLNSTDLRINGNGTEVSNT 120

Query: 29  SKILFTSTR 3
            K+L TSTR
Sbjct: 121 HKMLITSTR 129


>emb|CBI19416.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 52/140 (37%), Positives = 66/140 (47%), Gaps = 34/140 (24%)
 Frame = -3

Query: 320 IMVAALSSTV---TST---DHQTK-RPPLLPSEKDN---VRKPKSRQVTSRYLXXXXXXX 171
           +MVAA+S+T    TS+    HQ   RPPL+PSE DN   +R+PK R+VTSRYL       
Sbjct: 1   MMVAAVSATPNPKTSSREGSHQNPTRPPLIPSEADNGVALRRPKGREVTSRYLSSSTSTS 60

Query: 170 XXXXXXXXXXXXXSRRFL--------------PTPSTPLKRTQSVERRK----------L 63
                            L              P PS+ +KR+QSVERR+           
Sbjct: 61  TSSSTSSSSSSRRCASPLVSRTASSSAVMTPMPAPSSLIKRSQSVERRRPVTPRPNTFDF 120

Query: 62  DSKNNGEVSVASKILFTSTR 3
              N GEV+ ASK+L TS R
Sbjct: 121 RPGNAGEVTTASKMLITSAR 140


>emb|CBI22469.3| unnamed protein product [Vitis vinifera]
          Length = 530

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 49/137 (35%), Positives = 63/137 (45%), Gaps = 31/137 (22%)
 Frame = -3

Query: 320 IMVAALSSTVT---------STDHQTK-----RPPLLPSEKDN---VRKPKSRQVTSRYL 192
           +MVAA+S   +         S  H T      RPPLLPSEKDN    ++PKSRQV+SRY+
Sbjct: 1   MMVAAISEAASTNRPNPKASSHTHDTHLRNPARPPLLPSEKDNGLVPKRPKSRQVSSRYM 60

Query: 191 XXXXXXXXXXXXXXXXXXXXSRRFLPTPSTPL-----------KRTQSVERRKLDSK--- 54
                                       STPL            R+ SV+RR+  +    
Sbjct: 61  SPSPSTSASVPRRCSSPLISRSTNSTASSTPLPVAASSTSSSFPRSHSVDRRRPATAAPG 120

Query: 53  NNGEVSVASKILFTSTR 3
           + GEVS AS++LFTSTR
Sbjct: 121 SAGEVSAASRLLFTSTR 137


>ref|XP_002263972.1| PREDICTED: uncharacterized protein LOC100242868 [Vitis vinifera]
          Length = 639

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 49/136 (36%), Positives = 62/136 (45%), Gaps = 31/136 (22%)
 Frame = -3

Query: 317 MVAALSSTVT---------STDHQTK-----RPPLLPSEKDN---VRKPKSRQVTSRYLX 189
           MVAA+S   +         S  H T      RPPLLPSEKDN    ++PKSRQV+SRY+ 
Sbjct: 1   MVAAISEAASTNRPNPKASSHTHDTHLRNPARPPLLPSEKDNGLVPKRPKSRQVSSRYMS 60

Query: 188 XXXXXXXXXXXXXXXXXXXSRRFLPTPSTPL-----------KRTQSVERRKLDSK---N 51
                                      STPL            R+ SV+RR+  +    +
Sbjct: 61  PSPSTSASVPRRCSSPLISRSTNSTASSTPLPVAASSTSSSFPRSHSVDRRRPATAAPGS 120

Query: 50  NGEVSVASKILFTSTR 3
            GEVS AS++LFTSTR
Sbjct: 121 AGEVSAASRLLFTSTR 136


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