BLASTX nr result
ID: Coptis24_contig00034806
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034806 (405 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Viti... 226 1e-57 emb|CAN65317.1| hypothetical protein VITISV_006410 [Vitis vinifera] 226 1e-57 ref|XP_004161089.1| PREDICTED: LOW QUALITY PROTEIN: polygalactur... 220 8e-56 ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like ... 220 8e-56 ref|XP_002311773.1| predicted protein [Populus trichocarpa] gi|2... 217 9e-55 >ref|XP_002266600.1| PREDICTED: polygalacturonase At1g48100 [Vitis vinifera] gi|297739064|emb|CBI28553.3| unnamed protein product [Vitis vinifera] Length = 505 Score = 226 bits (576), Expect = 1e-57 Identities = 107/135 (79%), Positives = 117/135 (86%) Frame = -1 Query: 405 VTVTGIKIINSPQCHLKFDNCIGVDVFDMSVSSPGDSLNTDGIHLQNSRDVVIRGTNIAC 226 VTVTGI I NSPQCHLKFDNC+GV V++MSVSSPGDS+NTDGIHLQNS+DV+I TN+AC Sbjct: 252 VTVTGITIQNSPQCHLKFDNCMGVSVYEMSVSSPGDSVNTDGIHLQNSKDVLIHATNLAC 311 Query: 225 GDDCVSIQTGCSNVYIHNVNCXXXXXXXXXXXGKDNTKACVSNITVRDILMHNTMNGVRI 46 GDDCVSIQTGCSNVYIHNVNC G+D TKACVSNITVRDI+MHNTMNGVRI Sbjct: 312 GDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGRDGTKACVSNITVRDIIMHNTMNGVRI 371 Query: 45 KTWQGGSGSVENVLF 1 KTWQGGSGSV+ VLF Sbjct: 372 KTWQGGSGSVQGVLF 386 >emb|CAN65317.1| hypothetical protein VITISV_006410 [Vitis vinifera] Length = 388 Score = 226 bits (576), Expect = 1e-57 Identities = 107/135 (79%), Positives = 117/135 (86%) Frame = -1 Query: 405 VTVTGIKIINSPQCHLKFDNCIGVDVFDMSVSSPGDSLNTDGIHLQNSRDVVIRGTNIAC 226 VTVTGI I NSPQCHLKFDNC+GV V++MSVSSPGDS+NTDGIHLQNS+DV+I TN+AC Sbjct: 135 VTVTGITIQNSPQCHLKFDNCMGVSVYEMSVSSPGDSVNTDGIHLQNSKDVLIHATNLAC 194 Query: 225 GDDCVSIQTGCSNVYIHNVNCXXXXXXXXXXXGKDNTKACVSNITVRDILMHNTMNGVRI 46 GDDCVSIQTGCSNVYIHNVNC G+D TKACVSNITVRDI+MHNTMNGVRI Sbjct: 195 GDDCVSIQTGCSNVYIHNVNCGPGHGISIGGLGRDGTKACVSNITVRDIIMHNTMNGVRI 254 Query: 45 KTWQGGSGSVENVLF 1 KTWQGGSGSV+ VLF Sbjct: 255 KTWQGGSGSVQGVLF 269 >ref|XP_004161089.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase At1g48100-like [Cucumis sativus] Length = 423 Score = 220 bits (561), Expect = 8e-56 Identities = 104/134 (77%), Positives = 116/134 (86%) Frame = -1 Query: 402 TVTGIKIINSPQCHLKFDNCIGVDVFDMSVSSPGDSLNTDGIHLQNSRDVVIRGTNIACG 223 TVTGI I NSPQCHLKFDNC+GV V D+SVSSPGDSLNTDGIHLQNS+DV+I T+++CG Sbjct: 170 TVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCG 229 Query: 222 DDCVSIQTGCSNVYIHNVNCXXXXXXXXXXXGKDNTKACVSNITVRDILMHNTMNGVRIK 43 DDCVSIQTGCSN+YIHNVNC GKD+TKACVSNITVRD+ MH+TMNGVRIK Sbjct: 230 DDCVSIQTGCSNIYIHNVNCGPGHGISIGSLGKDHTKACVSNITVRDVTMHDTMNGVRIK 289 Query: 42 TWQGGSGSVENVLF 1 TWQGGSGSV+NVLF Sbjct: 290 TWQGGSGSVQNVLF 303 >ref|XP_004142980.1| PREDICTED: polygalacturonase At1g48100-like [Cucumis sativus] Length = 505 Score = 220 bits (561), Expect = 8e-56 Identities = 104/134 (77%), Positives = 116/134 (86%) Frame = -1 Query: 402 TVTGIKIINSPQCHLKFDNCIGVDVFDMSVSSPGDSLNTDGIHLQNSRDVVIRGTNIACG 223 TVTGI I NSPQCHLKFDNC+GV V D+SVSSPGDSLNTDGIHLQNS+DV+I T+++CG Sbjct: 252 TVTGITIQNSPQCHLKFDNCVGVLVHDISVSSPGDSLNTDGIHLQNSKDVLIHSTSLSCG 311 Query: 222 DDCVSIQTGCSNVYIHNVNCXXXXXXXXXXXGKDNTKACVSNITVRDILMHNTMNGVRIK 43 DDCVSIQTGCSN+YIHNVNC GKD+TKACVSNITVRD+ MH+TMNGVRIK Sbjct: 312 DDCVSIQTGCSNIYIHNVNCGPGHGISIGSLGKDHTKACVSNITVRDVTMHDTMNGVRIK 371 Query: 42 TWQGGSGSVENVLF 1 TWQGGSGSV+NVLF Sbjct: 372 TWQGGSGSVQNVLF 385 >ref|XP_002311773.1| predicted protein [Populus trichocarpa] gi|222851593|gb|EEE89140.1| predicted protein [Populus trichocarpa] Length = 517 Score = 217 bits (552), Expect = 9e-55 Identities = 103/135 (76%), Positives = 114/135 (84%) Frame = -1 Query: 405 VTVTGIKIINSPQCHLKFDNCIGVDVFDMSVSSPGDSLNTDGIHLQNSRDVVIRGTNIAC 226 VTVTGI I NSPQCHLKFDNC+GV V DM VSSPG+S NTDGIHLQNS+DV+IR T++AC Sbjct: 264 VTVTGITIQNSPQCHLKFDNCVGVVVHDMRVSSPGNSPNTDGIHLQNSKDVLIRSTDLAC 323 Query: 225 GDDCVSIQTGCSNVYIHNVNCXXXXXXXXXXXGKDNTKACVSNITVRDILMHNTMNGVRI 46 GDDCVSIQTGC+NVYIHNVNC GKDNTKACVSNITVRD++MH TM GVR+ Sbjct: 324 GDDCVSIQTGCTNVYIHNVNCGPGHGISIGGLGKDNTKACVSNITVRDVVMHGTMTGVRV 383 Query: 45 KTWQGGSGSVENVLF 1 KTWQGGSGSV+ VLF Sbjct: 384 KTWQGGSGSVQGVLF 398