BLASTX nr result

ID: Coptis24_contig00034805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034805
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271557.1| PREDICTED: uncharacterized protein LOC100253...    76   3e-12
ref|XP_004138826.1| PREDICTED: uncharacterized protein LOC101220...    66   3e-09
ref|XP_002298911.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_003540600.1| PREDICTED: uncharacterized protein LOC100780...    64   2e-08
ref|XP_002525512.1| conserved hypothetical protein [Ricinus comm...    62   6e-08

>ref|XP_002271557.1| PREDICTED: uncharacterized protein LOC100253283 [Vitis vinifera]
          Length = 248

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 34/47 (72%), Positives = 38/47 (80%)
 Frame = -1

Query: 143 PATDSNRGGGGVCMMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPI 3
           P   S+ G GGVCMMR+ WRDEQHPSFI+FI SFL+ NSFRLN VPI
Sbjct: 16  PPNVSSSGSGGVCMMRNTWRDEQHPSFINFISSFLKANSFRLNFVPI 62


>ref|XP_004138826.1| PREDICTED: uncharacterized protein LOC101220741 [Cucumis sativus]
           gi|449490245|ref|XP_004158549.1| PREDICTED:
           uncharacterized LOC101220741 [Cucumis sativus]
          Length = 247

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/39 (74%), Positives = 33/39 (84%)
 Frame = -1

Query: 119 GGGVCMMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPI 3
           GGGVC+M + WRDEQHPSFI+FI +FL  NSFRLN VPI
Sbjct: 23  GGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPI 61


>ref|XP_002298911.1| predicted protein [Populus trichocarpa] gi|222846169|gb|EEE83716.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = -1

Query: 113 GVCMMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPI 3
           GVCMM + WRDEQHPSFI+FI SFL  NSFRLN VPI
Sbjct: 19  GVCMMNTKWRDEQHPSFINFIASFLSANSFRLNFVPI 55


>ref|XP_003540600.1| PREDICTED: uncharacterized protein LOC100780115 [Glycine max]
          Length = 235

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/47 (59%), Positives = 35/47 (74%)
 Frame = -1

Query: 143 PATDSNRGGGGVCMMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPI 3
           P  D   G  GVC+MR+ W+++QHPSFI+FI +FL  NSFRLN VPI
Sbjct: 3   PLLDIVVGTAGVCLMRNAWKEDQHPSFINFISTFLSANSFRLNFVPI 49


>ref|XP_002525512.1| conserved hypothetical protein [Ricinus communis]
           gi|223535191|gb|EEF36870.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 248

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/42 (64%), Positives = 30/42 (71%)
 Frame = -1

Query: 128 NRGGGGVCMMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPI 3
           N    GVCMM S W+ EQ PSFI+F+ SFL  NSFRLN VPI
Sbjct: 21  NAAAAGVCMMNSKWKQEQSPSFINFVSSFLSANSFRLNFVPI 62


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