BLASTX nr result
ID: Coptis24_contig00034805
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034805 (227 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002271557.1| PREDICTED: uncharacterized protein LOC100253... 76 3e-12 ref|XP_004138826.1| PREDICTED: uncharacterized protein LOC101220... 66 3e-09 ref|XP_002298911.1| predicted protein [Populus trichocarpa] gi|2... 66 3e-09 ref|XP_003540600.1| PREDICTED: uncharacterized protein LOC100780... 64 2e-08 ref|XP_002525512.1| conserved hypothetical protein [Ricinus comm... 62 6e-08 >ref|XP_002271557.1| PREDICTED: uncharacterized protein LOC100253283 [Vitis vinifera] Length = 248 Score = 76.3 bits (186), Expect = 3e-12 Identities = 34/47 (72%), Positives = 38/47 (80%) Frame = -1 Query: 143 PATDSNRGGGGVCMMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPI 3 P S+ G GGVCMMR+ WRDEQHPSFI+FI SFL+ NSFRLN VPI Sbjct: 16 PPNVSSSGSGGVCMMRNTWRDEQHPSFINFISSFLKANSFRLNFVPI 62 >ref|XP_004138826.1| PREDICTED: uncharacterized protein LOC101220741 [Cucumis sativus] gi|449490245|ref|XP_004158549.1| PREDICTED: uncharacterized LOC101220741 [Cucumis sativus] Length = 247 Score = 66.2 bits (160), Expect = 3e-09 Identities = 29/39 (74%), Positives = 33/39 (84%) Frame = -1 Query: 119 GGGVCMMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPI 3 GGGVC+M + WRDEQHPSFI+FI +FL NSFRLN VPI Sbjct: 23 GGGVCLMSNVWRDEQHPSFINFISNFLCSNSFRLNFVPI 61 >ref|XP_002298911.1| predicted protein [Populus trichocarpa] gi|222846169|gb|EEE83716.1| predicted protein [Populus trichocarpa] Length = 241 Score = 66.2 bits (160), Expect = 3e-09 Identities = 29/37 (78%), Positives = 31/37 (83%) Frame = -1 Query: 113 GVCMMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPI 3 GVCMM + WRDEQHPSFI+FI SFL NSFRLN VPI Sbjct: 19 GVCMMNTKWRDEQHPSFINFIASFLSANSFRLNFVPI 55 >ref|XP_003540600.1| PREDICTED: uncharacterized protein LOC100780115 [Glycine max] Length = 235 Score = 63.5 bits (153), Expect = 2e-08 Identities = 28/47 (59%), Positives = 35/47 (74%) Frame = -1 Query: 143 PATDSNRGGGGVCMMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPI 3 P D G GVC+MR+ W+++QHPSFI+FI +FL NSFRLN VPI Sbjct: 3 PLLDIVVGTAGVCLMRNAWKEDQHPSFINFISTFLSANSFRLNFVPI 49 >ref|XP_002525512.1| conserved hypothetical protein [Ricinus communis] gi|223535191|gb|EEF36870.1| conserved hypothetical protein [Ricinus communis] Length = 248 Score = 61.6 bits (148), Expect = 6e-08 Identities = 27/42 (64%), Positives = 30/42 (71%) Frame = -1 Query: 128 NRGGGGVCMMRSNWRDEQHPSFIHFICSFLRENSFRLNIVPI 3 N GVCMM S W+ EQ PSFI+F+ SFL NSFRLN VPI Sbjct: 21 NAAAAGVCMMNSKWKQEQSPSFINFVSSFLSANSFRLNFVPI 62