BLASTX nr result

ID: Coptis24_contig00034801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034801
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]   133   2e-29
ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, parti...   132   3e-29
gb|ACB28472.1| polyprotein [Ananas comosus]                           130   8e-29
ref|XP_004146399.1| PREDICTED: uncharacterized protein LOC101219...   130   1e-28
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...   130   1e-28

>emb|CAN68669.1| hypothetical protein VITISV_039388 [Vitis vinifera]
          Length = 1360

 Score =  133 bits (334), Expect = 2e-29
 Identities = 60/89 (67%), Positives = 73/89 (82%)
 Frame = -2

Query: 268 VFAEPKHLPPTRTSDHHIPLKPNTEPTNQRPYKYPYVQKAVIEKLVQEMLESGLIQPSHS 89
           VF  P  LPP R+ DH IPL+P+  P + RPY+YPY QK  IEK+V+E+L+SGLI+PS+S
Sbjct: 537 VFESPTTLPPRRSHDHKIPLQPSAGPVSVRPYRYPYYQKTEIEKMVKELLQSGLIRPSNS 596

Query: 88  PFASPILLVKKKDGSWRFCVDYRKLNDIT 2
           PF+SPILLVKK DG+WRFCVDYR LNDIT
Sbjct: 597 PFSSPILLVKKADGAWRFCVDYRALNDIT 625


>ref|XP_004153003.1| PREDICTED: enzymatic polyprotein-like, partial [Cucumis sativus]
          Length = 1049

 Score =  132 bits (332), Expect = 3e-29
 Identities = 61/90 (67%), Positives = 71/90 (78%)
 Frame = -2

Query: 271 DVFAEPKHLPPTRTSDHHIPLKPNTEPTNQRPYKYPYVQKAVIEKLVQEMLESGLIQPSH 92
           D+F EPK LPP R  DH I L    +P N RPYKY YVQK  IEKLV EML++G+I+PSH
Sbjct: 553 DLFEEPKGLPPKRECDHRILLVTGQKPINVRPYKYGYVQKEEIEKLVVEMLQAGVIRPSH 612

Query: 91  SPFASPILLVKKKDGSWRFCVDYRKLNDIT 2
           SP++SP+LLVKKKDG WRFCVDYRKLN +T
Sbjct: 613 SPYSSPVLLVKKKDGGWRFCVDYRKLNQVT 642


>gb|ACB28472.1| polyprotein [Ananas comosus]
          Length = 953

 Score =  130 bits (328), Expect = 8e-29
 Identities = 59/90 (65%), Positives = 69/90 (76%)
 Frame = -2

Query: 271 DVFAEPKHLPPTRTSDHHIPLKPNTEPTNQRPYKYPYVQKAVIEKLVQEMLESGLIQPSH 92
           D+F EP+ LPP R  DH IPLK  T P N RPY+YP  QK  IEKLVQEML  G+I PS+
Sbjct: 203 DLFEEPQGLPPVRLHDHKIPLKEGTNPINVRPYRYPAYQKTEIEKLVQEMLSQGVITPSN 262

Query: 91  SPFASPILLVKKKDGSWRFCVDYRKLNDIT 2
           SP++SP++LVKKKDGSWR C+DYR LND T
Sbjct: 263 SPYSSPVVLVKKKDGSWRLCIDYRSLNDST 292


>ref|XP_004146399.1| PREDICTED: uncharacterized protein LOC101219499 [Cucumis sativus]
          Length = 718

 Score =  130 bits (327), Expect = 1e-28
 Identities = 58/90 (64%), Positives = 75/90 (83%)
 Frame = -2

Query: 271 DVFAEPKHLPPTRTSDHHIPLKPNTEPTNQRPYKYPYVQKAVIEKLVQEMLESGLIQPSH 92
           DVF  P+ LPP R+ +HHI LK  T+P N RPY+Y Y QKA +E+LV+EML SG+I+PS+
Sbjct: 572 DVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERLVEEMLSSGVIRPSN 631

Query: 91  SPFASPILLVKKKDGSWRFCVDYRKLNDIT 2
           SP++SP+LLV+KKDGSWRFCVDYR LN++T
Sbjct: 632 SPYSSPVLLVRKKDGSWRFCVDYRVLNNVT 661


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score =  130 bits (326), Expect = 1e-28
 Identities = 58/90 (64%), Positives = 74/90 (82%)
 Frame = -2

Query: 271  DVFAEPKHLPPTRTSDHHIPLKPNTEPTNQRPYKYPYVQKAVIEKLVQEMLESGLIQPSH 92
            DVF  P+ LPP R+ +HHI LK  T+P N RPY+Y Y QKA +E+LV+EML SG+I+PS+
Sbjct: 1512 DVFTWPETLPPRRSIEHHIYLKQGTDPVNVRPYRYGYQQKAEMERLVEEMLSSGVIRPSN 1571

Query: 91   SPFASPILLVKKKDGSWRFCVDYRKLNDIT 2
            SP++SP+LLV+KKDGSWRFCVDYR LN +T
Sbjct: 1572 SPYSSPVLLVRKKDGSWRFCVDYRVLNSVT 1601


Top