BLASTX nr result

ID: Coptis24_contig00034779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034779
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512723.1| multidrug resistance-associated protein, put...   137   9e-31
ref|XP_002264313.1| PREDICTED: ABC transporter C family member 1...   133   1e-29
ref|XP_003542136.1| PREDICTED: ABC transporter C family member 1...   132   2e-29
ref|XP_004137882.1| PREDICTED: ABC transporter C family member 1...   129   2e-28
ref|XP_003637285.1| ABC transporter C family member [Medicago tr...   124   6e-27

>ref|XP_002512723.1| multidrug resistance-associated protein, putative [Ricinus
           communis] gi|223547734|gb|EEF49226.1| multidrug
           resistance-associated protein, putative [Ricinus
           communis]
          Length = 1395

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/83 (79%), Positives = 77/83 (92%)
 Frame = +1

Query: 1   VFNDCFGFVGPMLLNKLIWFLQRGSGNLDGYILTLSLGLSSVIKSFLDTQYTFNLSKLKL 180
           VFNDC GF GP+LLNKLI FLQRGS + DGY+L LSLGL+SV+KSFLDTQY+F+L+KLKL
Sbjct: 226 VFNDCIGFAGPLLLNKLIRFLQRGSAHWDGYLLALSLGLTSVLKSFLDTQYSFHLAKLKL 285

Query: 181 KLRASIMTVIYRKCLCVSLADRS 249
           KLRASIMTVIY+KCLCV+LA+RS
Sbjct: 286 KLRASIMTVIYQKCLCVTLAERS 308


>ref|XP_002264313.1| PREDICTED: ABC transporter C family member 13-like [Vitis vinifera]
          Length = 1305

 Score =  133 bits (335), Expect = 1e-29
 Identities = 64/83 (77%), Positives = 74/83 (89%)
 Frame = +1

Query: 1   VFNDCFGFVGPMLLNKLIWFLQRGSGNLDGYILTLSLGLSSVIKSFLDTQYTFNLSKLKL 180
           V NDC GFVGP+LLN LI FLQ+GSGNLDGYIL +++GL  + KSFLDTQYTF+LSKLKL
Sbjct: 132 VVNDCIGFVGPVLLNNLIRFLQQGSGNLDGYILAVAMGLIPIFKSFLDTQYTFHLSKLKL 191

Query: 181 KLRASIMTVIYRKCLCVSLADRS 249
           KLR+SIMTVIY KCLCV+LA+RS
Sbjct: 192 KLRSSIMTVIYHKCLCVNLAERS 214


>ref|XP_003542136.1| PREDICTED: ABC transporter C family member 13-like [Glycine max]
          Length = 1384

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/83 (78%), Positives = 75/83 (90%)
 Frame = +1

Query: 1   VFNDCFGFVGPMLLNKLIWFLQRGSGNLDGYILTLSLGLSSVIKSFLDTQYTFNLSKLKL 180
           V NDC GF GP+LLNKLI FLQ+GS NLDGY+L LSLGL+S+IKSFLDTQYTF+LSKLKL
Sbjct: 213 VINDCIGFAGPLLLNKLIQFLQQGSVNLDGYLLALSLGLTSIIKSFLDTQYTFHLSKLKL 272

Query: 181 KLRASIMTVIYRKCLCVSLADRS 249
           KLR+SIMT+IY KCL V+LA+RS
Sbjct: 273 KLRSSIMTLIYEKCLRVNLAERS 295


>ref|XP_004137882.1| PREDICTED: ABC transporter C family member 13-like [Cucumis
           sativus]
          Length = 2377

 Score =  129 bits (325), Expect = 2e-28
 Identities = 60/83 (72%), Positives = 74/83 (89%)
 Frame = +1

Query: 1   VFNDCFGFVGPMLLNKLIWFLQRGSGNLDGYILTLSLGLSSVIKSFLDTQYTFNLSKLKL 180
           V NDC  FVGPMLLN+LI +LQ+GSG  DGY+L +SLGL+S+ KSFLDTQYTF+LSKLKL
Sbjct: 252 VLNDCINFVGPMLLNRLIHYLQQGSGTSDGYVLAISLGLTSIFKSFLDTQYTFHLSKLKL 311

Query: 181 KLRASIMTVIYRKCLCVSLADRS 249
           KLR+S+MTVIY+KCL +S+A+RS
Sbjct: 312 KLRSSVMTVIYQKCLSISIAERS 334


>ref|XP_003637285.1| ABC transporter C family member [Medicago truncatula]
           gi|355503220|gb|AES84423.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1539

 Score =  124 bits (312), Expect = 6e-27
 Identities = 62/83 (74%), Positives = 72/83 (86%)
 Frame = +1

Query: 1   VFNDCFGFVGPMLLNKLIWFLQRGSGNLDGYILTLSLGLSSVIKSFLDTQYTFNLSKLKL 180
           V ND  GF GP+LLNKLI FLQ+GS + DGY+L LSLGL+S+IKSFLDTQYTF LSKLKL
Sbjct: 309 VINDGIGFAGPLLLNKLIKFLQQGSASWDGYLLALSLGLTSIIKSFLDTQYTFRLSKLKL 368

Query: 181 KLRASIMTVIYRKCLCVSLADRS 249
           KLR+SIMT+IY KCL V+LA+RS
Sbjct: 369 KLRSSIMTLIYEKCLYVNLAERS 391


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