BLASTX nr result
ID: Coptis24_contig00034775
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034775 (201 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004147594.1| PREDICTED: transcription factor bHLH126-like... 60 2e-07 ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|2... 58 7e-07 ref|XP_004147595.1| PREDICTED: transcription factor bHLH120-like... 56 3e-06 >ref|XP_004147594.1| PREDICTED: transcription factor bHLH126-like [Cucumis sativus] gi|449513404|ref|XP_004164317.1| PREDICTED: transcription factor bHLH126-like [Cucumis sativus] Length = 260 Score = 59.7 bits (143), Expect = 2e-07 Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 1/53 (1%) Frame = +2 Query: 44 RRKLCATTNTVSEGSSDTNSNKKKRMK-MHREVERQRRQDMATLYSTLRSLVP 199 RRK NT + + NSN+ K+ K MHR+VERQRRQ+M++LYSTLRSL+P Sbjct: 56 RRKKPVPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLP 108 >ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|222868860|gb|EEF05991.1| predicted protein [Populus trichocarpa] Length = 246 Score = 58.2 bits (139), Expect = 7e-07 Identities = 28/59 (47%), Positives = 44/59 (74%) Frame = +2 Query: 23 DKLQLHRRRKLCATTNTVSEGSSDTNSNKKKRMKMHREVERQRRQDMATLYSTLRSLVP 199 + ++ RRR + + N +E + D N+N KK+M MHR++ERQRRQ+M TLY++LR+L+P Sbjct: 44 NNMEKGRRRNIISMDN--NEAARDNNNNSKKKM-MHRDIERQRRQEMTTLYASLRALLP 99 >ref|XP_004147595.1| PREDICTED: transcription factor bHLH120-like [Cucumis sativus] gi|449513402|ref|XP_004164316.1| PREDICTED: transcription factor bHLH120-like [Cucumis sativus] Length = 255 Score = 55.8 bits (133), Expect = 3e-06 Identities = 28/59 (47%), Positives = 44/59 (74%) Frame = +2 Query: 23 DKLQLHRRRKLCATTNTVSEGSSDTNSNKKKRMKMHREVERQRRQDMATLYSTLRSLVP 199 +K + RRRK T+ + + + + N +KKK++ +HR+VERQRRQ+M+TLY+ LRSL+P Sbjct: 50 EKPKKGRRRKSPNTSADIEDENPNPNEHKKKKI-IHRDVERQRRQEMSTLYAALRSLLP 107