BLASTX nr result

ID: Coptis24_contig00034775 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034775
         (201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147594.1| PREDICTED: transcription factor bHLH126-like...    60   2e-07
ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07
ref|XP_004147595.1| PREDICTED: transcription factor bHLH120-like...    56   3e-06

>ref|XP_004147594.1| PREDICTED: transcription factor bHLH126-like [Cucumis sativus]
           gi|449513404|ref|XP_004164317.1| PREDICTED:
           transcription factor bHLH126-like [Cucumis sativus]
          Length = 260

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/53 (56%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
 Frame = +2

Query: 44  RRKLCATTNTVSEGSSDTNSNKKKRMK-MHREVERQRRQDMATLYSTLRSLVP 199
           RRK     NT  +   + NSN+ K+ K MHR+VERQRRQ+M++LYSTLRSL+P
Sbjct: 56  RRKKPVPANTSDDKDDENNSNEHKKKKIMHRDVERQRRQEMSSLYSTLRSLLP 108


>ref|XP_002321864.1| predicted protein [Populus trichocarpa] gi|222868860|gb|EEF05991.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 28/59 (47%), Positives = 44/59 (74%)
 Frame = +2

Query: 23  DKLQLHRRRKLCATTNTVSEGSSDTNSNKKKRMKMHREVERQRRQDMATLYSTLRSLVP 199
           + ++  RRR + +  N  +E + D N+N KK+M MHR++ERQRRQ+M TLY++LR+L+P
Sbjct: 44  NNMEKGRRRNIISMDN--NEAARDNNNNSKKKM-MHRDIERQRRQEMTTLYASLRALLP 99


>ref|XP_004147595.1| PREDICTED: transcription factor bHLH120-like [Cucumis sativus]
           gi|449513402|ref|XP_004164316.1| PREDICTED:
           transcription factor bHLH120-like [Cucumis sativus]
          Length = 255

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 28/59 (47%), Positives = 44/59 (74%)
 Frame = +2

Query: 23  DKLQLHRRRKLCATTNTVSEGSSDTNSNKKKRMKMHREVERQRRQDMATLYSTLRSLVP 199
           +K +  RRRK   T+  + + + + N +KKK++ +HR+VERQRRQ+M+TLY+ LRSL+P
Sbjct: 50  EKPKKGRRRKSPNTSADIEDENPNPNEHKKKKI-IHRDVERQRRQEMSTLYAALRSLLP 107


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