BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034772
         (802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22241.3| unnamed protein product [Vitis vinifera]              322   6e-86
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...   322   6e-86
ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containi...   295   8e-78
ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containi...   295   8e-78
ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|2...   275   6e-72

>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score =  322 bits (825), Expect = 6e-86
 Identities = 157/266 (59%), Positives = 204/266 (76%)
 Frame = +1

Query: 1    VYIDMIENGFGLGIENMPTVESIVKLLCKKRKVKEARNVVRKLVASGIEPSRAILNLVAN 180
            VY+DM+E GF L   +M  +E++++LLC+  K++E R++V+K++  G+ PS  IL+ +AN
Sbjct: 260  VYLDMVEMGFDLSNADMANLENVIRLLCRDGKIQEGRSLVKKVMGLGLNPSSLILDEIAN 319

Query: 181  GYSEKKDFDDLLNFLKERKFAPDVPVCHKILFSQCKYFGSEQAYVFMLELESLGFTPDEM 360
            GY EKKDF+D L+F  E   AP V V +KI++S C+ FG+E+A +F+ ELE LGF+PDE+
Sbjct: 320  GYCEKKDFEDALSFFVEMNCAPSVVVGNKIMYSLCRDFGTERADLFLQELEHLGFSPDEI 379

Query: 361  TFGIFISSSSKEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEM 540
            TFGI IS   +EGKLK+AFIYLSE+LSR LKPDI  YNA++SGVF +G+WKHA +I HEM
Sbjct: 380  TFGILISWCCREGKLKNAFIYLSEILSRDLKPDICSYNAIISGVFKEGLWKHAQDILHEM 439

Query: 541  LENGPAPDLSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFK 720
            ++ G  PDL TFRVLLAGYCK RRF EAKA V EMVN+G++QL   EDPLSKAF +L   
Sbjct: 440  VDMGIKPDLLTFRVLLAGYCKARRFGEAKATVGEMVNYGLIQLCSQEDPLSKAFMVLELD 499

Query: 721  PSMVKVKRDNDAGLSKAEFFDTLGNG 798
            P  ++VKRDND G SK EFFD LGNG
Sbjct: 500  PLAIRVKRDNDVGFSKTEFFDNLGNG 525


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Vitis vinifera]
          Length = 1273

 Score =  322 bits (825), Expect = 6e-86
 Identities = 157/266 (59%), Positives = 204/266 (76%)
 Frame = +1

Query: 1    VYIDMIENGFGLGIENMPTVESIVKLLCKKRKVKEARNVVRKLVASGIEPSRAILNLVAN 180
            VY+DM+E GF L   +M  +E++++LLC+  K++E R++V+K++  G+ PS  IL+ +AN
Sbjct: 277  VYLDMVEMGFDLSNADMANLENVIRLLCRDGKIQEGRSLVKKVMGLGLNPSSLILDEIAN 336

Query: 181  GYSEKKDFDDLLNFLKERKFAPDVPVCHKILFSQCKYFGSEQAYVFMLELESLGFTPDEM 360
            GY EKKDF+D L+F  E   AP V V +KI++S C+ FG+E+A +F+ ELE LGF+PDE+
Sbjct: 337  GYCEKKDFEDALSFFVEMNCAPSVVVGNKIMYSLCRDFGTERADLFLQELEHLGFSPDEI 396

Query: 361  TFGIFISSSSKEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEM 540
            TFGI IS   +EGKLK+AFIYLSE+LSR LKPDI  YNA++SGVF +G+WKHA +I HEM
Sbjct: 397  TFGILISWCCREGKLKNAFIYLSEILSRDLKPDICSYNAIISGVFKEGLWKHAQDILHEM 456

Query: 541  LENGPAPDLSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFK 720
            ++ G  PDL TFRVLLAGYCK RRF EAKA V EMVN+G++QL   EDPLSKAF +L   
Sbjct: 457  VDMGIKPDLLTFRVLLAGYCKARRFGEAKATVGEMVNYGLIQLCSQEDPLSKAFMVLELD 516

Query: 721  PSMVKVKRDNDAGLSKAEFFDTLGNG 798
            P  ++VKRDND G SK EFFD LGNG
Sbjct: 517  PLAIRVKRDNDVGFSKTEFFDNLGNG 542


>ref|XP_004163793.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Cucumis sativus]
          Length = 1225

 Score =  295 bits (755), Expect = 8e-78
 Identities = 148/266 (55%), Positives = 191/266 (71%)
 Frame = +1

Query: 1    VYIDMIENGFGLGIENMPTVESIVKLLCKKRKVKEARNVVRKLVASGIEPSRAILNLVAN 180
            V  DM+E GFGLG E   + +++++LLC +  V EARN+V+K VA    PS  +L  +  
Sbjct: 248  VCTDMVEMGFGLGDEEKASFDNVIRLLCWQGNVLEARNLVKKFVALDFRPSDEVLYQITR 307

Query: 181  GYSEKKDFDDLLNFLKERKFAPDVPVCHKILFSQCKYFGSEQAYVFMLELESLGFTPDEM 360
            GY +KKDF+DLL+F  E K  P+V   +KI++S CK FGSE AY+F+ ELE  GF PDE+
Sbjct: 308  GYCDKKDFEDLLSFFFEIKTPPNVSSGNKIIYSLCKDFGSESAYLFLRELEHTGFKPDEI 367

Query: 361  TFGIFISSSSKEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEM 540
            TFGI I  S  EG L+ AFIY+SELLS  LKPD+H YNAL+SG+F KG+W++A  I  EM
Sbjct: 368  TFGILICWSCHEGNLRQAFIYMSELLSSGLKPDLHSYNALISGMFKKGLWENAQGILAEM 427

Query: 541  LENGPAPDLSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFK 720
            ++ G  P+LSTFR+LLAGYCK R+F EAK IV+EM   G ++LS V+D L K F  LGF 
Sbjct: 428  VDQGIEPNLSTFRILLAGYCKARQFEEAKKIVIEMEICGFIKLSSVDDQLCKIFSFLGFS 487

Query: 721  PSMVKVKRDNDAGLSKAEFFDTLGNG 798
             S V++KRDN+ G+SK EFFDTLGNG
Sbjct: 488  ESSVRLKRDNNTGVSKTEFFDTLGNG 513


>ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Cucumis sativus]
          Length = 1246

 Score =  295 bits (755), Expect = 8e-78
 Identities = 148/266 (55%), Positives = 191/266 (71%)
 Frame = +1

Query: 1    VYIDMIENGFGLGIENMPTVESIVKLLCKKRKVKEARNVVRKLVASGIEPSRAILNLVAN 180
            V  DM+E GFGLG E   + +++++LLC +  V EARN+V+K VA    PS  +L  +  
Sbjct: 248  VCTDMVEMGFGLGDEEKASFDNVIRLLCWQGNVLEARNLVKKFVALDFRPSDEVLYQITR 307

Query: 181  GYSEKKDFDDLLNFLKERKFAPDVPVCHKILFSQCKYFGSEQAYVFMLELESLGFTPDEM 360
            GY +KKDF+DLL+F  E K  P+V   +KI++S CK FGSE AY+F+ ELE  GF PDE+
Sbjct: 308  GYCDKKDFEDLLSFFFEIKTPPNVSSGNKIIYSLCKDFGSESAYLFLRELEHTGFKPDEI 367

Query: 361  TFGIFISSSSKEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEM 540
            TFGI I  S  EG L+ AFIY+SELLS  LKPD+H YNAL+SG+F KG+W++A  I  EM
Sbjct: 368  TFGILICWSCHEGNLRQAFIYMSELLSSGLKPDLHSYNALISGMFKKGLWENAQGILAEM 427

Query: 541  LENGPAPDLSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFK 720
            ++ G  P+LSTFR+LLAGYCK R+F EAK IV+EM   G ++LS V+D L K F  LGF 
Sbjct: 428  VDQGIEPNLSTFRILLAGYCKARQFEEAKKIVIEMEICGFIKLSSVDDQLCKIFSFLGFS 487

Query: 721  PSMVKVKRDNDAGLSKAEFFDTLGNG 798
             S V++KRDN+ G+SK EFFDTLGNG
Sbjct: 488  ESSVRLKRDNNTGVSKTEFFDTLGNG 513


>ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|222866871|gb|EEF04002.1|
           predicted protein [Populus trichocarpa]
          Length = 1158

 Score =  275 bits (704), Expect = 6e-72
 Identities = 140/266 (52%), Positives = 188/266 (70%)
 Frame = +1

Query: 1   VYIDMIENGFGLGIENMPTVESIVKLLCKKRKVKEARNVVRKLVASGIEPSRAILNLVAN 180
           V +D++E G  +      + E++V+LLC+   ++EARN +RKL+A G EPS  +LN +A 
Sbjct: 163 VSLDLVELGISVSEGENASFENVVRLLCRDGMIREARNFIRKLMALGFEPSSLVLNEIAL 222

Query: 181 GYSEKKDFDDLLNFLKERKFAPDVPVCHKILFSQCKYFGSEQAYVFMLELESLGFTPDEM 360
           GY E+ DF+D +    E K +P+V   +KILFS C  FG E+A +F L+LE LGF PDE+
Sbjct: 223 GYCEQ-DFEDSVRCFAEMKCSPNVLTGNKILFSLCTGFGVERANLFRLKLEHLGFMPDEV 281

Query: 361 TFGIFISSSSKEGKLKDAFIYLSELLSRCLKPDIHCYNALLSGVFVKGMWKHASEIFHEM 540
           TFGI I    +E KL  AF YLSELLSR LKP+I CY+AL+S +F +GMW+HA +I  EM
Sbjct: 282 TFGILICWCCRERKLSGAFNYLSELLSRGLKPNIWCYHALISALFKEGMWEHAQDILDEM 341

Query: 541 LENGPAPDLSTFRVLLAGYCKFRRFNEAKAIVLEMVNHGVVQLSPVEDPLSKAFGILGFK 720
           ++ G AP LSTF++LLAGYC+ RRF+E K ++ EMVN G+++ S +EDPLSKAF +L  K
Sbjct: 342 VDMGTAPVLSTFKILLAGYCRARRFDEVKVVIHEMVNRGLIESSALEDPLSKAFMVLELK 401

Query: 721 PSMVKVKRDNDAGLSKAEFFDTLGNG 798
              V++KRDND   SK EFFD LGNG
Sbjct: 402 TLSVRLKRDNDVEFSKTEFFDNLGNG 427