BLASTX nr result

ID: Coptis24_contig00034739 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034739
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301635.1| predicted protein [Populus trichocarpa] gi|2...   136   4e-30
ref|XP_002271254.1| PREDICTED: uncharacterized protein LOC100251...   132   6e-29
ref|XP_002531024.1| conserved hypothetical protein [Ricinus comm...   130   4e-28
ref|XP_002321117.1| predicted protein [Populus trichocarpa] gi|2...   129   8e-28
ref|XP_002442048.1| hypothetical protein SORBIDRAFT_08g008250 [S...   110   2e-22

>ref|XP_002301635.1| predicted protein [Populus trichocarpa] gi|222843361|gb|EEE80908.1|
           predicted protein [Populus trichocarpa]
          Length = 188

 Score =  136 bits (343), Expect = 4e-30
 Identities = 78/167 (46%), Positives = 97/167 (58%), Gaps = 7/167 (4%)
 Frame = +2

Query: 5   SSDSDTKASRKRKCCWDHI--NSESRIQTSIELQVEDSLPLDWEQCLDLKSGRLYYLNRN 178
           SS+S+   SRKRK   D     + S IQ S++L V+D LPLDWEQCLDL+SGR+YYLNR 
Sbjct: 23  SSESENNPSRKRKFSSDQYLPKNGSPIQASVDLHVKDPLPLDWEQCLDLESGRMYYLNRK 82

Query: 179 TMKKSWKWPNQDQKLDLELN----IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 346
           T++KSW WP ++QKLDLELN    +                                   
Sbjct: 83  TLRKSWNWP-RNQKLDLELNMSSTVVSNCLDQCSSSNNSLEASNKIHAPSNSNMVALACL 141

Query: 347 XCHLLVMLCRSSPSCPNCKYVHSL-LAQESLVSQNPVKPFNTLSLLN 484
            CHLLV+L +SSPSCPNCKYVHSL + Q  L   +P +  +TLSLLN
Sbjct: 142 NCHLLVILSKSSPSCPNCKYVHSLPILQSPLPKVSPSRSLSTLSLLN 188


>ref|XP_002271254.1| PREDICTED: uncharacterized protein LOC100251518 [Vitis vinifera]
           gi|297745164|emb|CBI39156.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  132 bits (333), Expect = 6e-29
 Identities = 77/170 (45%), Positives = 98/170 (57%), Gaps = 10/170 (5%)
 Frame = +2

Query: 5   SSDSDTKASRKRKCCWDHI--NSESRIQTSIELQVEDSLPLDWEQCLDLKSGRLYYLNRN 178
           SS+S+     K++   DH+   S+  IQTS++LQ++D LPLDWEQCLDL+SGR+YYLNR 
Sbjct: 51  SSESEANYPSKKRKFSDHLFNRSDPMIQTSVDLQLKDPLPLDWEQCLDLESGRMYYLNRK 110

Query: 179 TMKKSWKWP--NQDQKLDLELNI-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 337
           T++KSW  P  +  QKLDLELNI                                     
Sbjct: 111 TLRKSWNCPKDHNQQKLDLELNISTLSNCPEKCSSFDSQRLQDHSKKHQHCSSSSNMVAL 170

Query: 338 XXXXCHLLVMLCRSSPSCPNCKYVHSLLAQESLVSQ-NPVKPFNTLSLLN 484
               CHLLV+L +SSPSCPNCKYVHSL  Q+   S+  P+K  +TLSLLN
Sbjct: 171 ACLNCHLLVILSKSSPSCPNCKYVHSLPTQQIPTSKAPPIKSLDTLSLLN 220


>ref|XP_002531024.1| conserved hypothetical protein [Ricinus communis]
           gi|223529399|gb|EEF31362.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 211

 Score =  130 bits (326), Expect = 4e-28
 Identities = 79/176 (44%), Positives = 93/176 (52%), Gaps = 17/176 (9%)
 Frame = +2

Query: 8   SDSDTKASRKRKCCWDH------INSESRIQTSIELQVEDSLPLDWEQCLDLKSGRLYYL 169
           S+ +  + +KRK   DH        +   IQ S +L V+D LPLDWEQCLDL+SGR+YYL
Sbjct: 37  SECNHSSRKKRKFLSDHHLLRTATTTGPPIQASFDLHVKDPLPLDWEQCLDLESGRMYYL 96

Query: 170 NRNTMKKSWKWPNQDQKLDLELNI---------XXXXXXXXXXXXXXXXXXXXXXXXXXX 322
           NR T++KSW WP +DQKLDLELNI                                    
Sbjct: 97  NRKTLRKSWNWP-KDQKLDLELNISPLTDCTPDHHQQCNNNGSNSVLLEDSRNNFSSPSS 155

Query: 323 XXXXXXXXXCHLLVMLCRSSPSCPNCKYVHSL--LAQESLVSQNPVKPFNTLSLLN 484
                    CHLLV+L RSSPSCPNCKYVHSL    Q  L   +P K  NTLSLLN
Sbjct: 156 NMVALACLNCHLLVILSRSSPSCPNCKYVHSLPITHQVLLPKISPTKSLNTLSLLN 211


>ref|XP_002321117.1| predicted protein [Populus trichocarpa] gi|222861890|gb|EEE99432.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  129 bits (323), Expect = 8e-28
 Identities = 75/168 (44%), Positives = 94/168 (55%), Gaps = 8/168 (4%)
 Frame = +2

Query: 5   SSDSDTKASRKRKCCWDH---INSESRIQTSIELQVEDSLPLDWEQCLDLKSGRLYYLNR 175
           SS+S+   SRKRK   D    + +   IQ S++L V+D LPLDWEQCLDL+SGR+YYLNR
Sbjct: 24  SSESENTPSRKRKFFSDQYQLLKNGPPIQASVDLHVKDPLPLDWEQCLDLESGRMYYLNR 83

Query: 176 NTMKKSWKWPNQDQKLDLELN----IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 343
            T++KSW WP + QKLDLELN    I                                  
Sbjct: 84  KTLRKSWNWPKK-QKLDLELNMSSTIPNCPDECSSSNSSLEDSNNKNHASSNSNMVALAC 142

Query: 344 XXCHLLVMLCRSSPSCPNCKYVHSLLAQESLVSQ-NPVKPFNTLSLLN 484
             CHLLV+  +SSPSCPNCKYVHS    +S   + +P +  +TLSLLN
Sbjct: 143 LNCHLLVIFSKSSPSCPNCKYVHSFPTLQSPQRKVSPTRSLSTLSLLN 190


>ref|XP_002442048.1| hypothetical protein SORBIDRAFT_08g008250 [Sorghum bicolor]
           gi|241942741|gb|EES15886.1| hypothetical protein
           SORBIDRAFT_08g008250 [Sorghum bicolor]
          Length = 231

 Score =  110 bits (276), Expect = 2e-22
 Identities = 72/181 (39%), Positives = 93/181 (51%), Gaps = 21/181 (11%)
 Frame = +2

Query: 5   SSDSDTKASRKRK---CCWDHINSESRIQTSIELQVEDSLPLDWEQCLDLKSGRLYYLNR 175
           SS+SD  + +KRK     W+  + +     S+ELQ+ D LPLDWEQCLDL+SGR+YYLNR
Sbjct: 54  SSESDGSSRKKRKHYTASWEEPHQQP--PASLELQLNDPLPLDWEQCLDLQSGRMYYLNR 111

Query: 176 NTMKKSWKWPNQDQKLDLELNI-----------XXXXXXXXXXXXXXXXXXXXXXXXXXX 322
            T+KKSW  P ++Q ++L+LNI                                      
Sbjct: 112 KTLKKSWVRP-REQSVNLDLNISTTAAVDSCAVADGAAAAAPDEDDEPRKPTGRALFSGG 170

Query: 323 XXXXXXXXXCHLLVMLCRSSPSCPNCKYVHSL--LAQESLVSQN-----PVKPFNTLSLL 481
                    CHLLVMLC+SSPSCPNCK+V  L   A  + V  +      VKP  TLSLL
Sbjct: 171 NMVAVPCANCHLLVMLCKSSPSCPNCKFVQPLAPAAPPAAVMAHRRLDAAVKPLETLSLL 230

Query: 482 N 484
           +
Sbjct: 231 H 231


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