BLASTX nr result
ID: Coptis24_contig00034739
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034739 (724 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002301635.1| predicted protein [Populus trichocarpa] gi|2... 136 4e-30 ref|XP_002271254.1| PREDICTED: uncharacterized protein LOC100251... 132 6e-29 ref|XP_002531024.1| conserved hypothetical protein [Ricinus comm... 130 4e-28 ref|XP_002321117.1| predicted protein [Populus trichocarpa] gi|2... 129 8e-28 ref|XP_002442048.1| hypothetical protein SORBIDRAFT_08g008250 [S... 110 2e-22 >ref|XP_002301635.1| predicted protein [Populus trichocarpa] gi|222843361|gb|EEE80908.1| predicted protein [Populus trichocarpa] Length = 188 Score = 136 bits (343), Expect = 4e-30 Identities = 78/167 (46%), Positives = 97/167 (58%), Gaps = 7/167 (4%) Frame = +2 Query: 5 SSDSDTKASRKRKCCWDHI--NSESRIQTSIELQVEDSLPLDWEQCLDLKSGRLYYLNRN 178 SS+S+ SRKRK D + S IQ S++L V+D LPLDWEQCLDL+SGR+YYLNR Sbjct: 23 SSESENNPSRKRKFSSDQYLPKNGSPIQASVDLHVKDPLPLDWEQCLDLESGRMYYLNRK 82 Query: 179 TMKKSWKWPNQDQKLDLELN----IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 346 T++KSW WP ++QKLDLELN + Sbjct: 83 TLRKSWNWP-RNQKLDLELNMSSTVVSNCLDQCSSSNNSLEASNKIHAPSNSNMVALACL 141 Query: 347 XCHLLVMLCRSSPSCPNCKYVHSL-LAQESLVSQNPVKPFNTLSLLN 484 CHLLV+L +SSPSCPNCKYVHSL + Q L +P + +TLSLLN Sbjct: 142 NCHLLVILSKSSPSCPNCKYVHSLPILQSPLPKVSPSRSLSTLSLLN 188 >ref|XP_002271254.1| PREDICTED: uncharacterized protein LOC100251518 [Vitis vinifera] gi|297745164|emb|CBI39156.3| unnamed protein product [Vitis vinifera] Length = 220 Score = 132 bits (333), Expect = 6e-29 Identities = 77/170 (45%), Positives = 98/170 (57%), Gaps = 10/170 (5%) Frame = +2 Query: 5 SSDSDTKASRKRKCCWDHI--NSESRIQTSIELQVEDSLPLDWEQCLDLKSGRLYYLNRN 178 SS+S+ K++ DH+ S+ IQTS++LQ++D LPLDWEQCLDL+SGR+YYLNR Sbjct: 51 SSESEANYPSKKRKFSDHLFNRSDPMIQTSVDLQLKDPLPLDWEQCLDLESGRMYYLNRK 110 Query: 179 TMKKSWKWP--NQDQKLDLELNI-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 337 T++KSW P + QKLDLELNI Sbjct: 111 TLRKSWNCPKDHNQQKLDLELNISTLSNCPEKCSSFDSQRLQDHSKKHQHCSSSSNMVAL 170 Query: 338 XXXXCHLLVMLCRSSPSCPNCKYVHSLLAQESLVSQ-NPVKPFNTLSLLN 484 CHLLV+L +SSPSCPNCKYVHSL Q+ S+ P+K +TLSLLN Sbjct: 171 ACLNCHLLVILSKSSPSCPNCKYVHSLPTQQIPTSKAPPIKSLDTLSLLN 220 >ref|XP_002531024.1| conserved hypothetical protein [Ricinus communis] gi|223529399|gb|EEF31362.1| conserved hypothetical protein [Ricinus communis] Length = 211 Score = 130 bits (326), Expect = 4e-28 Identities = 79/176 (44%), Positives = 93/176 (52%), Gaps = 17/176 (9%) Frame = +2 Query: 8 SDSDTKASRKRKCCWDH------INSESRIQTSIELQVEDSLPLDWEQCLDLKSGRLYYL 169 S+ + + +KRK DH + IQ S +L V+D LPLDWEQCLDL+SGR+YYL Sbjct: 37 SECNHSSRKKRKFLSDHHLLRTATTTGPPIQASFDLHVKDPLPLDWEQCLDLESGRMYYL 96 Query: 170 NRNTMKKSWKWPNQDQKLDLELNI---------XXXXXXXXXXXXXXXXXXXXXXXXXXX 322 NR T++KSW WP +DQKLDLELNI Sbjct: 97 NRKTLRKSWNWP-KDQKLDLELNISPLTDCTPDHHQQCNNNGSNSVLLEDSRNNFSSPSS 155 Query: 323 XXXXXXXXXCHLLVMLCRSSPSCPNCKYVHSL--LAQESLVSQNPVKPFNTLSLLN 484 CHLLV+L RSSPSCPNCKYVHSL Q L +P K NTLSLLN Sbjct: 156 NMVALACLNCHLLVILSRSSPSCPNCKYVHSLPITHQVLLPKISPTKSLNTLSLLN 211 >ref|XP_002321117.1| predicted protein [Populus trichocarpa] gi|222861890|gb|EEE99432.1| predicted protein [Populus trichocarpa] Length = 190 Score = 129 bits (323), Expect = 8e-28 Identities = 75/168 (44%), Positives = 94/168 (55%), Gaps = 8/168 (4%) Frame = +2 Query: 5 SSDSDTKASRKRKCCWDH---INSESRIQTSIELQVEDSLPLDWEQCLDLKSGRLYYLNR 175 SS+S+ SRKRK D + + IQ S++L V+D LPLDWEQCLDL+SGR+YYLNR Sbjct: 24 SSESENTPSRKRKFFSDQYQLLKNGPPIQASVDLHVKDPLPLDWEQCLDLESGRMYYLNR 83 Query: 176 NTMKKSWKWPNQDQKLDLELN----IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 343 T++KSW WP + QKLDLELN I Sbjct: 84 KTLRKSWNWPKK-QKLDLELNMSSTIPNCPDECSSSNSSLEDSNNKNHASSNSNMVALAC 142 Query: 344 XXCHLLVMLCRSSPSCPNCKYVHSLLAQESLVSQ-NPVKPFNTLSLLN 484 CHLLV+ +SSPSCPNCKYVHS +S + +P + +TLSLLN Sbjct: 143 LNCHLLVIFSKSSPSCPNCKYVHSFPTLQSPQRKVSPTRSLSTLSLLN 190 >ref|XP_002442048.1| hypothetical protein SORBIDRAFT_08g008250 [Sorghum bicolor] gi|241942741|gb|EES15886.1| hypothetical protein SORBIDRAFT_08g008250 [Sorghum bicolor] Length = 231 Score = 110 bits (276), Expect = 2e-22 Identities = 72/181 (39%), Positives = 93/181 (51%), Gaps = 21/181 (11%) Frame = +2 Query: 5 SSDSDTKASRKRK---CCWDHINSESRIQTSIELQVEDSLPLDWEQCLDLKSGRLYYLNR 175 SS+SD + +KRK W+ + + S+ELQ+ D LPLDWEQCLDL+SGR+YYLNR Sbjct: 54 SSESDGSSRKKRKHYTASWEEPHQQP--PASLELQLNDPLPLDWEQCLDLQSGRMYYLNR 111 Query: 176 NTMKKSWKWPNQDQKLDLELNI-----------XXXXXXXXXXXXXXXXXXXXXXXXXXX 322 T+KKSW P ++Q ++L+LNI Sbjct: 112 KTLKKSWVRP-REQSVNLDLNISTTAAVDSCAVADGAAAAAPDEDDEPRKPTGRALFSGG 170 Query: 323 XXXXXXXXXCHLLVMLCRSSPSCPNCKYVHSL--LAQESLVSQN-----PVKPFNTLSLL 481 CHLLVMLC+SSPSCPNCK+V L A + V + VKP TLSLL Sbjct: 171 NMVAVPCANCHLLVMLCKSSPSCPNCKFVQPLAPAAPPAAVMAHRRLDAAVKPLETLSLL 230 Query: 482 N 484 + Sbjct: 231 H 231