BLASTX nr result

ID: Coptis24_contig00034724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034724
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264952.1| PREDICTED: leucine-rich repeat receptor-like...   195   4e-48
ref|XP_002532709.1| Receptor protein kinase CLAVATA1 precursor, ...   191   7e-47
ref|XP_002297907.1| predicted protein [Populus trichocarpa] gi|2...   189   2e-46
ref|XP_002304615.1| predicted protein [Populus trichocarpa] gi|2...   183   1e-44
ref|XP_003518489.1| PREDICTED: leucine-rich repeat receptor-like...   178   5e-43

>ref|XP_002264952.1| PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein
            kinase BAM3 [Vitis vinifera]
          Length = 988

 Score =  195 bits (495), Expect = 4e-48
 Identities = 94/110 (85%), Positives = 100/110 (90%)
 Frame = -1

Query: 332  KNSKLWKLTAFQKIEFGSTDILECLTDNNIIGRGGAGIVYKGAMPNGELVAVKRLLGISK 153
            K S  WKLTAFQK+EFGS DILECL DNN+IGRGGAGIVY+G MPNGE VAVK+L GISK
Sbjct: 680  KTSNSWKLTAFQKLEFGSEDILECLKDNNVIGRGGAGIVYRGTMPNGEQVAVKKLQGISK 739

Query: 152  GSSHDNGFSAEVRTLGRIRHRNIVRLLAFCSNKETNLLVYEYMSNGSLGE 3
            GSSHDNG SAE++TLGRIRHRNIVRLLAFCSNKETNLLVYEYM NGSLGE
Sbjct: 740  GSSHDNGLSAEIQTLGRIRHRNIVRLLAFCSNKETNLLVYEYMPNGSLGE 789


>ref|XP_002532709.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
            communis] gi|223527555|gb|EEF29676.1| Receptor protein
            kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 991

 Score =  191 bits (484), Expect = 7e-47
 Identities = 92/110 (83%), Positives = 100/110 (90%)
 Frame = -1

Query: 332  KNSKLWKLTAFQKIEFGSTDILECLTDNNIIGRGGAGIVYKGAMPNGELVAVKRLLGISK 153
            KNS+ WKLTAFQK+EFG  DILEC+ +NNIIGRGGAGIVYKG MPNGE VAVK+LLGISK
Sbjct: 683  KNSRSWKLTAFQKLEFGCGDILECVKENNIIGRGGAGIVYKGIMPNGEQVAVKKLLGISK 742

Query: 152  GSSHDNGFSAEVRTLGRIRHRNIVRLLAFCSNKETNLLVYEYMSNGSLGE 3
            GSSHDNG SAE++TLGRIRHRNIVRLL FCSNKE NLLVYEYM +GSLGE
Sbjct: 743  GSSHDNGLSAEIQTLGRIRHRNIVRLLGFCSNKEMNLLVYEYMPHGSLGE 792


>ref|XP_002297907.1| predicted protein [Populus trichocarpa] gi|222845165|gb|EEE82712.1|
           predicted protein [Populus trichocarpa]
          Length = 913

 Score =  189 bits (480), Expect = 2e-46
 Identities = 91/110 (82%), Positives = 101/110 (91%)
 Frame = -1

Query: 332 KNSKLWKLTAFQKIEFGSTDILECLTDNNIIGRGGAGIVYKGAMPNGELVAVKRLLGISK 153
           +NS  WKLTAFQK+EFG  +ILEC+ +NNIIGRGGAGIVY+G MPNGE VAVK+LLGIS+
Sbjct: 605 RNSNSWKLTAFQKLEFGCENILECVKENNIIGRGGAGIVYRGLMPNGEPVAVKKLLGISR 664

Query: 152 GSSHDNGFSAEVRTLGRIRHRNIVRLLAFCSNKETNLLVYEYMSNGSLGE 3
           GSSHDNG SAEV+TLG+IRHRNIVRLLAFCSNKETNLLVYEYM NGSLGE
Sbjct: 665 GSSHDNGLSAEVQTLGQIRHRNIVRLLAFCSNKETNLLVYEYMPNGSLGE 714


>ref|XP_002304615.1| predicted protein [Populus trichocarpa] gi|222842047|gb|EEE79594.1|
            predicted protein [Populus trichocarpa]
          Length = 988

 Score =  183 bits (464), Expect = 1e-44
 Identities = 89/110 (80%), Positives = 98/110 (89%)
 Frame = -1

Query: 332  KNSKLWKLTAFQKIEFGSTDILECLTDNNIIGRGGAGIVYKGAMPNGELVAVKRLLGISK 153
            +NS  WKLTAFQK+ FGS DILEC+ +NNIIGRGGAG VY+G M  GE VAVK+LLGISK
Sbjct: 680  RNSNSWKLTAFQKLGFGSEDILECIKENNIIGRGGAGTVYRGLMATGEPVAVKKLLGISK 739

Query: 152  GSSHDNGFSAEVRTLGRIRHRNIVRLLAFCSNKETNLLVYEYMSNGSLGE 3
            GSSHDNG SAEV+TLG+IRHRNIVRLLAFCSNKE+NLLVYEYM NGSLGE
Sbjct: 740  GSSHDNGLSAEVQTLGQIRHRNIVRLLAFCSNKESNLLVYEYMPNGSLGE 789


>ref|XP_003518489.1| PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein
            kinase BAM3-like [Glycine max]
          Length = 988

 Score =  178 bits (451), Expect = 5e-43
 Identities = 83/110 (75%), Positives = 96/110 (87%)
 Frame = -1

Query: 332  KNSKLWKLTAFQKIEFGSTDILECLTDNNIIGRGGAGIVYKGAMPNGELVAVKRLLGISK 153
            ++S  WKLT FQ +EFGS DI+ C+ ++N+IGRGGAG+VY G MPNGE VAVK+LLGI+K
Sbjct: 680  RHSNSWKLTTFQNLEFGSEDIIGCIKESNVIGRGGAGVVYHGTMPNGEQVAVKKLLGINK 739

Query: 152  GSSHDNGFSAEVRTLGRIRHRNIVRLLAFCSNKETNLLVYEYMSNGSLGE 3
            G SHDNG SAE+RTLGRIRHR IVRLLAFCSN+ETNLLVYEYM NGSLGE
Sbjct: 740  GCSHDNGLSAEIRTLGRIRHRYIVRLLAFCSNRETNLLVYEYMPNGSLGE 789


Top