BLASTX nr result

ID: Coptis24_contig00034723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034723
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301261.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [...    62   5e-08
emb|CBI16590.3| unnamed protein product [Vitis vinifera]               62   5e-08
ref|XP_002511647.1| DNA binding protein, putative [Ricinus commu...    59   5e-07
ref|XP_002320710.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-07

>ref|XP_002301261.1| predicted protein [Populus trichocarpa] gi|222842987|gb|EEE80534.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 34/54 (62%), Positives = 43/54 (79%), Gaps = 3/54 (5%)
 Frame = +2

Query: 5   DRLP---PSSAVLPDPMASFLACQAQQPMTMDAYTRMATFYQQLLHQQQISNSK 157
           +RLP   PS+ V+PDP+++FLACQ+Q PMTMDAY+RMA+ YQQL  Q   SNSK
Sbjct: 101 ERLPTAAPSATVMPDPLSAFLACQSQ-PMTMDAYSRMASMYQQLHQQSPASNSK 153


>ref|XP_002275629.2| PREDICTED: transcription factor UNE10-like [Vitis vinifera]
          Length = 465

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/51 (58%), Positives = 40/51 (78%)
 Frame = +2

Query: 5   DRLPPSSAVLPDPMASFLACQAQQPMTMDAYTRMATFYQQLLHQQQISNSK 157
           DRLP +  ++PDP+A+FLACQ+ QPMTMDAY+RMA  YQ  LHQ   S+++
Sbjct: 413 DRLPAAPTMVPDPLAAFLACQS-QPMTMDAYSRMAALYQH-LHQHPASSAR 461


>emb|CBI16590.3| unnamed protein product [Vitis vinifera]
          Length = 211

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/51 (58%), Positives = 40/51 (78%)
 Frame = +2

Query: 5   DRLPPSSAVLPDPMASFLACQAQQPMTMDAYTRMATFYQQLLHQQQISNSK 157
           DRLP +  ++PDP+A+FLACQ+ QPMTMDAY+RMA  YQ  LHQ   S+++
Sbjct: 159 DRLPAAPTMVPDPLAAFLACQS-QPMTMDAYSRMAALYQH-LHQHPASSAR 207


>ref|XP_002511647.1| DNA binding protein, putative [Ricinus communis]
           gi|223548827|gb|EEF50316.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 465

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/52 (61%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = +2

Query: 5   DRLPPSS-AVLPDPMASFLACQAQQPMTMDAYTRMATFYQQLLHQQQISNSK 157
           DRL  +S  V+ DP+A+FLACQ Q PMTMDAY+RMA  YQQL  Q   S+SK
Sbjct: 414 DRLQTASPTVMHDPLAAFLACQTQ-PMTMDAYSRMAAIYQQLQQQPPASSSK 464


>ref|XP_002320710.1| predicted protein [Populus trichocarpa] gi|222861483|gb|EEE99025.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/51 (62%), Positives = 37/51 (72%)
 Frame = +2

Query: 5   DRLPPSSAVLPDPMASFLACQAQQPMTMDAYTRMATFYQQLLHQQQISNSK 157
           DRL  ++A   DPM++FLACQ Q PMTMDAY+RMA  YQQL  Q   SNSK
Sbjct: 95  DRLQTTAA---DPMSAFLACQTQ-PMTMDAYSRMAAMYQQLHQQPPASNSK 141


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