BLASTX nr result

ID: Coptis24_contig00034714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034714
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304338.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|XP_002326727.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37
gb|ABK93187.1| unknown [Populus trichocarpa]                          159   2e-37
ref|XP_002518412.1| conserved hypothetical protein [Ricinus comm...   159   2e-37
ref|XP_003517052.1| PREDICTED: uncharacterized protein LOC100795...   155   3e-36

>ref|XP_002304338.1| predicted protein [Populus trichocarpa] gi|222841770|gb|EEE79317.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  160 bits (404), Expect = 1e-37
 Identities = 65/84 (77%), Positives = 78/84 (92%)
 Frame = +3

Query: 3   KPPTQCGYTFVNPTYWISPINMVADTDCPLWSNEQTQLCYSCDSCKAGLLANLKREWRRV 182
           KPPT+CGYTFVNPTYWISPIN+ AD DC  W+N+Q QLCY+CDSCKAGLLANLKREWRR 
Sbjct: 171 KPPTECGYTFVNPTYWISPINIAADMDCLKWNNDQNQLCYNCDSCKAGLLANLKREWRRA 230

Query: 183 NIILVVTLVALICVYVVGCCAFRN 254
           +++L++TL+ALICVY++GCCAFRN
Sbjct: 231 DVVLLITLIALICVYLIGCCAFRN 254


>ref|XP_002326727.1| predicted protein [Populus trichocarpa] gi|222834049|gb|EEE72526.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  159 bits (403), Expect = 2e-37
 Identities = 69/84 (82%), Positives = 76/84 (90%)
 Frame = +3

Query: 3   KPPTQCGYTFVNPTYWISPINMVADTDCPLWSNEQTQLCYSCDSCKAGLLANLKREWRRV 182
           KPPTQCGYTFVNPTYWISPIN  AD DC  W+N+Q QLCY+CDSCKAGLLANLK EWRR 
Sbjct: 171 KPPTQCGYTFVNPTYWISPINNAADMDCLQWNNDQNQLCYNCDSCKAGLLANLKEEWRRA 230

Query: 183 NIILVVTLVALICVYVVGCCAFRN 254
           +IIL++TLVALICVY+VGCCAFRN
Sbjct: 231 DIILLITLVALICVYLVGCCAFRN 254


>gb|ABK93187.1| unknown [Populus trichocarpa]
          Length = 269

 Score =  159 bits (403), Expect = 2e-37
 Identities = 69/84 (82%), Positives = 76/84 (90%)
 Frame = +3

Query: 3   KPPTQCGYTFVNPTYWISPINMVADTDCPLWSNEQTQLCYSCDSCKAGLLANLKREWRRV 182
           KPPTQCGYTFVNPTYWISPIN  AD DC  W+N+Q QLCY+CDSCKAGLLANLK EWRR 
Sbjct: 171 KPPTQCGYTFVNPTYWISPINNAADMDCLQWNNDQNQLCYNCDSCKAGLLANLKEEWRRA 230

Query: 183 NIILVVTLVALICVYVVGCCAFRN 254
           +IIL++TLVALICVY+VGCCAFRN
Sbjct: 231 DIILLITLVALICVYLVGCCAFRN 254


>ref|XP_002518412.1| conserved hypothetical protein [Ricinus communis]
           gi|223542257|gb|EEF43799.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 269

 Score =  159 bits (402), Expect = 2e-37
 Identities = 68/84 (80%), Positives = 77/84 (91%)
 Frame = +3

Query: 3   KPPTQCGYTFVNPTYWISPINMVADTDCPLWSNEQTQLCYSCDSCKAGLLANLKREWRRV 182
           KPPTQCGYTFVNPTYWISPIN  AD DC  W+N+Q QLCYSCDSCKAGLLAN+K+EWRR 
Sbjct: 171 KPPTQCGYTFVNPTYWISPINNAADMDCLNWNNDQNQLCYSCDSCKAGLLANIKKEWRRA 230

Query: 183 NIILVVTLVALICVYVVGCCAFRN 254
           +IIL++TLVALICVY++GCCAFRN
Sbjct: 231 DIILLITLVALICVYLLGCCAFRN 254


>ref|XP_003517052.1| PREDICTED: uncharacterized protein LOC100795775 [Glycine max]
          Length = 269

 Score =  155 bits (393), Expect = 3e-36
 Identities = 65/84 (77%), Positives = 75/84 (89%)
 Frame = +3

Query: 3   KPPTQCGYTFVNPTYWISPINMVADTDCPLWSNEQTQLCYSCDSCKAGLLANLKREWRRV 182
           KPPTQC YTFVNPTYWISPIN  AD DC  WSN+QTQLCY+CDSCKAGLLANL++EWRR 
Sbjct: 171 KPPTQCAYTFVNPTYWISPINTAADMDCLQWSNDQTQLCYNCDSCKAGLLANLRKEWRRA 230

Query: 183 NIILVVTLVALICVYVVGCCAFRN 254
           N+IL++T++ LI VY+VGCCAFRN
Sbjct: 231 NVILIITVIVLIIVYLVGCCAFRN 254


Top