BLASTX nr result

ID: Coptis24_contig00034709 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034709
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142765.1| PREDICTED: protein FIZZY-RELATED 3-like [Cuc...    77   1e-12
ref|NP_196888.2| protein FIZZY-related 3 [Arabidopsis thaliana] ...    77   1e-12
ref|XP_002873630.1| WD-40 repeat family protein [Arabidopsis lyr...    77   1e-12
ref|XP_002315217.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002312104.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12

>ref|XP_004142765.1| PREDICTED: protein FIZZY-RELATED 3-like [Cucumis sativus]
           gi|449483830|ref|XP_004156705.1| PREDICTED: protein
           FIZZY-RELATED 3-like [Cucumis sativus]
          Length = 475

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = +3

Query: 3   IVTGAGDETLRFWNVFPSLKLQAPIRDSGLWSLGRTQIR 119
           IVTGAGDETLRFWN+FPS+K Q P+RD+GLWSLGRTQIR
Sbjct: 437 IVTGAGDETLRFWNIFPSMKTQTPVRDTGLWSLGRTQIR 475


>ref|NP_196888.2| protein FIZZY-related 3 [Arabidopsis thaliana]
           gi|334187668|ref|NP_001190305.1| protein FIZZY-related 3
           [Arabidopsis thaliana]
           gi|75330295|sp|Q8LPL5.1|FZR3_ARATH RecName: Full=Protein
           FIZZY-RELATED 3; AltName: Full=Cell cycle switch protein
           CCS52B gi|20466231|gb|AAM20433.1| cell cycle switch
           protein [Arabidopsis thaliana]
           gi|25084105|gb|AAN72176.1| cell cycle switch protein
           [Arabidopsis thaliana] gi|332004565|gb|AED91948.1|
           protein FIZZY-related 3 [Arabidopsis thaliana]
           gi|332004566|gb|AED91949.1| protein FIZZY-related 3
           [Arabidopsis thaliana]
          Length = 481

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 33/39 (84%), Positives = 38/39 (97%)
 Frame = +3

Query: 3   IVTGAGDETLRFWNVFPSLKLQAPIRDSGLWSLGRTQIR 119
           IVTGAGDETLRFWNVFPS+K+Q P++D+GLWSLGRTQIR
Sbjct: 443 IVTGAGDETLRFWNVFPSVKMQTPVKDTGLWSLGRTQIR 481


>ref|XP_002873630.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319467|gb|EFH49889.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 481

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 33/39 (84%), Positives = 38/39 (97%)
 Frame = +3

Query: 3   IVTGAGDETLRFWNVFPSLKLQAPIRDSGLWSLGRTQIR 119
           IVTGAGDETLRFWNVFPS+K+Q P++D+GLWSLGRTQIR
Sbjct: 443 IVTGAGDETLRFWNVFPSVKMQTPVKDTGLWSLGRTQIR 481


>ref|XP_002315217.1| predicted protein [Populus trichocarpa] gi|222864257|gb|EEF01388.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = +3

Query: 3   IVTGAGDETLRFWNVFPSLKLQAPIRDSGLWSLGRTQIR 119
           IVTGAGDETLRFWNVFPS+K Q P++D+GLWSLGRTQIR
Sbjct: 447 IVTGAGDETLRFWNVFPSMKTQTPVKDTGLWSLGRTQIR 485


>ref|XP_002312104.1| predicted protein [Populus trichocarpa] gi|222851924|gb|EEE89471.1|
           predicted protein [Populus trichocarpa]
          Length = 485

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = +3

Query: 3   IVTGAGDETLRFWNVFPSLKLQAPIRDSGLWSLGRTQIR 119
           IVTGAGDETLRFWNVFPS+K Q P++D+GLWSLGRTQIR
Sbjct: 447 IVTGAGDETLRFWNVFPSMKTQTPVKDTGLWSLGRTQIR 485


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