BLASTX nr result
ID: Coptis24_contig00034697
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034697 (729 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCH50966.1| T4.5 [Malus x robusta] 165 8e-41 emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] 152 7e-36 emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] 152 1e-35 emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera] 146 2e-33 emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] 145 2e-33 >emb|CCH50966.1| T4.5 [Malus x robusta] Length = 1670 Score = 165 bits (417), Expect(2) = 8e-41 Identities = 101/249 (40%), Positives = 131/249 (52%), Gaps = 25/249 (10%) Frame = +2 Query: 56 FIGYSLNQKGYRCLHIESGRVFISRHVIFNENQFPFKG-------HSSSLTSPLD----- 199 F+GYSLN GYRC S R++ISRHV+F+E+ FP+K HS ++SPL Sbjct: 983 FLGYSLNHSGYRCWDPISNRLYISRHVVFDESLFPYKSLSSQASHHSPCVSSPLHPPMSL 1042 Query: 200 ---IPQ*FLKQSTSISPLQTSSQRKXXXXXXXXXXXXXXVPT----------IIXXXXXX 340 +P L+Q +S P R +P+ + Sbjct: 1043 HLPLPVSHLEQQSS--PAAALEGRNASPPSIFSTAAHTTIPSSAQESLHTPPVSSSPAEP 1100 Query: 341 XXXXXXXXXNTHNMQTRAKQGIFKPKVFHTTKHPLPHALHTILSEIPSTPTCYTQAIKDS 520 NTH M TRAK GI KPKVF TKH LP + + L+ +P TP+ + QA K S Sbjct: 1101 PPLPPPIPVNTHTMITRAKAGIHKPKVFTATKHQLPSTVDS-LTALPPTPSTFLQASKSS 1159 Query: 521 AWKDAMVSEFNALLKNRTWILVPPSSAQNIVDNKWVFRLKQKADGSIDKHKARLVAKGFN 700 W +AM EF AL TW LVP S NIV KWVF++K K DG+I+++KARLVAKGF+ Sbjct: 1160 HWMEAMQFEFQALQSTGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFH 1219 Query: 701 QQYGFDYLE 727 QQ G D+ E Sbjct: 1220 QQEGLDFSE 1228 Score = 28.5 bits (62), Expect(2) = 8e-41 Identities = 11/20 (55%), Positives = 15/20 (75%) Frame = +3 Query: 3 WLRPYTNNKLELWSKLCVSL 62 WL+PY+ +KL+ SK CV L Sbjct: 965 WLQPYSRDKLDFKSKQCVFL 984 >emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera] Length = 1449 Score = 152 bits (385), Expect(2) = 7e-36 Identities = 91/227 (40%), Positives = 123/227 (54%), Gaps = 3/227 (1%) Frame = +2 Query: 56 FIGYSLNQKGYRCLHIESGRVFISRHVIFNENQFPFKGHSSSLTSPLDIPQ*-FLK-QST 229 F+GYS N KGY CL+ +GR++++RHV+F+E FPF+ +S + IP FL S Sbjct: 770 FLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPFQSTPDQSSSVVTIPTPAFLPCSSP 829 Query: 230 SISPLQT-SSQRKXXXXXXXXXXXXXXVPTIIXXXXXXXXXXXXXXXNTHNMQTRAKQGI 406 +S L++ ++ +P +I N H M TRAK GI Sbjct: 830 PVSSLRSHTTXSTSSPPLTNMPSSTISLPDLIQVPFADISTSEPHPTNQHPMVTRAKNGI 889 Query: 407 FKPKVFHTTKHPLPHALHTILSEIPSTPTCYTQAIKDSAWKDAMVSEFNALLKNRTWILV 586 K KV+ S S PT +TQA+KDS W AM EF+AL +N TW LV Sbjct: 890 SKKKVY--------------FSSHISEPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHLV 935 Query: 587 PPSSAQNIVDNKWVFRLKQKADGSIDKHKARLVAKGFNQQYGFDYLE 727 PP S NI+ KWV++LK K DG++D++KARLVA+GF Q G DY E Sbjct: 936 PPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLVAQGFTQTLGLDYFE 982 Score = 24.3 bits (51), Expect(2) = 7e-36 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +3 Query: 3 WLRPYTNNKLELWSKLCVSL 62 ++RPY NKL S CV L Sbjct: 752 YIRPYNKNKLSYRSSQCVFL 771 >emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera] Length = 1271 Score = 152 bits (383), Expect(2) = 1e-35 Identities = 90/227 (39%), Positives = 123/227 (54%), Gaps = 3/227 (1%) Frame = +2 Query: 56 FIGYSLNQKGYRCLHIESGRVFISRHVIFNENQFPFKGHSSSLTSPLDIPQ*-FLK-QST 229 F+GYS N KGY CL+ +GR++++RHV+F+E FPF+ +S + IP FL S Sbjct: 579 FLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPFQSTPDQSSSVVTIPTPAFLPCSSP 638 Query: 230 SISPLQT-SSQRKXXXXXXXXXXXXXXVPTIIXXXXXXXXXXXXXXXNTHNMQTRAKQGI 406 +S L++ ++ +P +I N H M TRAK GI Sbjct: 639 PVSSLRSHTTPSTSSPPLTNMPSSTISLPDLIQVPFADISTSEPHPTNQHPMVTRAKNGI 698 Query: 407 FKPKVFHTTKHPLPHALHTILSEIPSTPTCYTQAIKDSAWKDAMVSEFNALLKNRTWILV 586 K KV+ S S PT +TQA+KDS W AM EF+AL +N TW LV Sbjct: 699 SKKKVY--------------FSSHISEPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHLV 744 Query: 587 PPSSAQNIVDNKWVFRLKQKADGSIDKHKARLVAKGFNQQYGFDYLE 727 PP S NI+ KWV++LK K DG++D++KARLVA+GF Q G +Y E Sbjct: 745 PPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLVAQGFTQTLGLBYFE 791 Score = 24.3 bits (51), Expect(2) = 1e-35 Identities = 10/20 (50%), Positives = 12/20 (60%) Frame = +3 Query: 3 WLRPYTNNKLELWSKLCVSL 62 ++RPY NKL S CV L Sbjct: 561 YIRPYNKNKLSYRSSQCVFL 580 >emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera] Length = 773 Score = 146 bits (368), Expect(2) = 2e-33 Identities = 91/235 (38%), Positives = 120/235 (51%), Gaps = 8/235 (3%) Frame = +2 Query: 47 TMC-FIGYSLNQKGYRCLHIESGRVFISRHVIFNENQFPFKGHSSSLTSPLDIPQ*FLKQ 223 T C F+GY+ KGY CL + + R++ISR+VIF+E+ FPF+ +SP P L Sbjct: 73 TACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPFQS-----SSPPSSPSPHLPS 127 Query: 224 STSI---SP-LQTSSQRKXXXXXXXXXXXXXXVPTIIXXXXXXXXXXXXXXXNTHNMQTR 391 ST SP L S +P NTH M TR Sbjct: 128 STPALINSPSLSAPSSPAVSSPIITSDSIPPLIPVPFATSSPAAPSPPPLPLNTHPMVTR 187 Query: 392 AKQGIFKPKVF---HTTKHPLPHALHTILSEIPSTPTCYTQAIKDSAWKDAMVSEFNALL 562 AK GI K + F HTT+ P Y+QA K+ +W AM SE+ ALL Sbjct: 188 AKSGIHKKRSFIVQHTTE-----------------PRTYSQAFKNDSWVQAMNSEYQALL 230 Query: 563 KNRTWILVPPSSAQNIVDNKWVFRLKQKADGSIDKHKARLVAKGFNQQYGFDYLE 727 +N TW LVPP S+ +IV +W+++LK + DGSID+HKARLVA+GF Q G DY + Sbjct: 231 RNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFD 285 Score = 22.7 bits (47), Expect(2) = 2e-33 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +3 Query: 6 LRPYTNNKLELWSKLCVSL 62 LRPYT +KL S CV L Sbjct: 60 LRPYTQHKLCYRSTACVFL 78 >emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera] Length = 1334 Score = 145 bits (367), Expect(2) = 2e-33 Identities = 92/235 (39%), Positives = 121/235 (51%), Gaps = 8/235 (3%) Frame = +2 Query: 47 TMC-FIGYSLNQKGYRCLHIESGRVFISRHVIFNENQFPFKGHSSSLTSPLDIPQ*FLKQ 223 T C F+GY+ KGY CL + + R++ISR+VIF+E+ FPF+ +SP P L Sbjct: 726 TACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPFQS-----SSPPSSPSPHLPS 780 Query: 224 STSI---SP-LQTSSQRKXXXXXXXXXXXXXXVPTIIXXXXXXXXXXXXXXXNTHNMQTR 391 ST SP L S +P NTH M TR Sbjct: 781 STPALINSPSLSAPSSPAVSSPIITSDSXPPLIPVPFATSSPAAPSPPPLPLNTHPMVTR 840 Query: 392 AKQGIFKPKVF---HTTKHPLPHALHTILSEIPSTPTCYTQAIKDSAWKDAMVSEFNALL 562 AK GI K + F HTT+ P Y+QA K+ +W AM SE+ ALL Sbjct: 841 AKSGIHKKRSFIVQHTTE-----------------PRTYSQAXKNDSWVQAMNSEYQALL 883 Query: 563 KNRTWILVPPSSAQNIVDNKWVFRLKQKADGSIDKHKARLVAKGFNQQYGFDYLE 727 +N TW LVPP S+ +IV +W+++LK + DGSID+HKARLVA+GF Q G DY + Sbjct: 884 RNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFD 938 Score = 22.7 bits (47), Expect(2) = 2e-33 Identities = 11/19 (57%), Positives = 12/19 (63%) Frame = +3 Query: 6 LRPYTNNKLELWSKLCVSL 62 LRPYT +KL S CV L Sbjct: 713 LRPYTQHKLCYRSTACVFL 731