BLASTX nr result

ID: Coptis24_contig00034697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034697
         (729 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                165   8e-41
emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]   152   7e-36
emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]   152   1e-35
emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]   146   2e-33
emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]   145   2e-33

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  165 bits (417), Expect(2) = 8e-41
 Identities = 101/249 (40%), Positives = 131/249 (52%), Gaps = 25/249 (10%)
 Frame = +2

Query: 56   FIGYSLNQKGYRCLHIESGRVFISRHVIFNENQFPFKG-------HSSSLTSPLD----- 199
            F+GYSLN  GYRC    S R++ISRHV+F+E+ FP+K        HS  ++SPL      
Sbjct: 983  FLGYSLNHSGYRCWDPISNRLYISRHVVFDESLFPYKSLSSQASHHSPCVSSPLHPPMSL 1042

Query: 200  ---IPQ*FLKQSTSISPLQTSSQRKXXXXXXXXXXXXXXVPT----------IIXXXXXX 340
               +P   L+Q +S  P      R               +P+          +       
Sbjct: 1043 HLPLPVSHLEQQSS--PAAALEGRNASPPSIFSTAAHTTIPSSAQESLHTPPVSSSPAEP 1100

Query: 341  XXXXXXXXXNTHNMQTRAKQGIFKPKVFHTTKHPLPHALHTILSEIPSTPTCYTQAIKDS 520
                     NTH M TRAK GI KPKVF  TKH LP  + + L+ +P TP+ + QA K S
Sbjct: 1101 PPLPPPIPVNTHTMITRAKAGIHKPKVFTATKHQLPSTVDS-LTALPPTPSTFLQASKSS 1159

Query: 521  AWKDAMVSEFNALLKNRTWILVPPSSAQNIVDNKWVFRLKQKADGSIDKHKARLVAKGFN 700
             W +AM  EF AL    TW LVP  S  NIV  KWVF++K K DG+I+++KARLVAKGF+
Sbjct: 1160 HWMEAMQFEFQALQSTGTWELVPNHSTYNIVGCKWVFKVKHKPDGTIERYKARLVAKGFH 1219

Query: 701  QQYGFDYLE 727
            QQ G D+ E
Sbjct: 1220 QQEGLDFSE 1228



 Score = 28.5 bits (62), Expect(2) = 8e-41
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +3

Query: 3    WLRPYTNNKLELWSKLCVSL 62
            WL+PY+ +KL+  SK CV L
Sbjct: 965  WLQPYSRDKLDFKSKQCVFL 984


>emb|CAN68489.1| hypothetical protein VITISV_037543 [Vitis vinifera]
          Length = 1449

 Score =  152 bits (385), Expect(2) = 7e-36
 Identities = 91/227 (40%), Positives = 123/227 (54%), Gaps = 3/227 (1%)
 Frame = +2

Query: 56   FIGYSLNQKGYRCLHIESGRVFISRHVIFNENQFPFKGHSSSLTSPLDIPQ*-FLK-QST 229
            F+GYS N KGY CL+  +GR++++RHV+F+E  FPF+      +S + IP   FL   S 
Sbjct: 770  FLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPFQSTPDQSSSVVTIPTPAFLPCSSP 829

Query: 230  SISPLQT-SSQRKXXXXXXXXXXXXXXVPTIIXXXXXXXXXXXXXXXNTHNMQTRAKQGI 406
             +S L++ ++                 +P +I               N H M TRAK GI
Sbjct: 830  PVSSLRSHTTXSTSSPPLTNMPSSTISLPDLIQVPFADISTSEPHPTNQHPMVTRAKNGI 889

Query: 407  FKPKVFHTTKHPLPHALHTILSEIPSTPTCYTQAIKDSAWKDAMVSEFNALLKNRTWILV 586
             K KV+               S   S PT +TQA+KDS W  AM  EF+AL +N TW LV
Sbjct: 890  SKKKVY--------------FSSHISEPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHLV 935

Query: 587  PPSSAQNIVDNKWVFRLKQKADGSIDKHKARLVAKGFNQQYGFDYLE 727
            PP S  NI+  KWV++LK K DG++D++KARLVA+GF Q  G DY E
Sbjct: 936  PPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLVAQGFTQTLGLDYFE 982



 Score = 24.3 bits (51), Expect(2) = 7e-36
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 3   WLRPYTNNKLELWSKLCVSL 62
           ++RPY  NKL   S  CV L
Sbjct: 752 YIRPYNKNKLSYRSSQCVFL 771


>emb|CAN67403.1| hypothetical protein VITISV_025614 [Vitis vinifera]
          Length = 1271

 Score =  152 bits (383), Expect(2) = 1e-35
 Identities = 90/227 (39%), Positives = 123/227 (54%), Gaps = 3/227 (1%)
 Frame = +2

Query: 56   FIGYSLNQKGYRCLHIESGRVFISRHVIFNENQFPFKGHSSSLTSPLDIPQ*-FLK-QST 229
            F+GYS N KGY CL+  +GR++++RHV+F+E  FPF+      +S + IP   FL   S 
Sbjct: 579  FLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPFQSTPDQSSSVVTIPTPAFLPCSSP 638

Query: 230  SISPLQT-SSQRKXXXXXXXXXXXXXXVPTIIXXXXXXXXXXXXXXXNTHNMQTRAKQGI 406
             +S L++ ++                 +P +I               N H M TRAK GI
Sbjct: 639  PVSSLRSHTTPSTSSPPLTNMPSSTISLPDLIQVPFADISTSEPHPTNQHPMVTRAKNGI 698

Query: 407  FKPKVFHTTKHPLPHALHTILSEIPSTPTCYTQAIKDSAWKDAMVSEFNALLKNRTWILV 586
             K KV+               S   S PT +TQA+KDS W  AM  EF+AL +N TW LV
Sbjct: 699  SKKKVY--------------FSSHISEPTTFTQAVKDSNWVLAMEKEFSALQRNNTWHLV 744

Query: 587  PPSSAQNIVDNKWVFRLKQKADGSIDKHKARLVAKGFNQQYGFDYLE 727
            PP S  NI+  KWV++LK K DG++D++KARLVA+GF Q  G +Y E
Sbjct: 745  PPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLVAQGFTQTLGLBYFE 791



 Score = 24.3 bits (51), Expect(2) = 1e-35
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +3

Query: 3   WLRPYTNNKLELWSKLCVSL 62
           ++RPY  NKL   S  CV L
Sbjct: 561 YIRPYNKNKLSYRSSQCVFL 580


>emb|CAN78451.1| hypothetical protein VITISV_005945 [Vitis vinifera]
          Length = 773

 Score =  146 bits (368), Expect(2) = 2e-33
 Identities = 91/235 (38%), Positives = 120/235 (51%), Gaps = 8/235 (3%)
 Frame = +2

Query: 47  TMC-FIGYSLNQKGYRCLHIESGRVFISRHVIFNENQFPFKGHSSSLTSPLDIPQ*FLKQ 223
           T C F+GY+   KGY CL + + R++ISR+VIF+E+ FPF+      +SP   P   L  
Sbjct: 73  TACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPFQS-----SSPPSSPSPHLPS 127

Query: 224 STSI---SP-LQTSSQRKXXXXXXXXXXXXXXVPTIIXXXXXXXXXXXXXXXNTHNMQTR 391
           ST     SP L   S                 +P                  NTH M TR
Sbjct: 128 STPALINSPSLSAPSSPAVSSPIITSDSIPPLIPVPFATSSPAAPSPPPLPLNTHPMVTR 187

Query: 392 AKQGIFKPKVF---HTTKHPLPHALHTILSEIPSTPTCYTQAIKDSAWKDAMVSEFNALL 562
           AK GI K + F   HTT+                 P  Y+QA K+ +W  AM SE+ ALL
Sbjct: 188 AKSGIHKKRSFIVQHTTE-----------------PRTYSQAFKNDSWVQAMNSEYQALL 230

Query: 563 KNRTWILVPPSSAQNIVDNKWVFRLKQKADGSIDKHKARLVAKGFNQQYGFDYLE 727
           +N TW LVPP S+ +IV  +W+++LK + DGSID+HKARLVA+GF Q  G DY +
Sbjct: 231 RNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFD 285



 Score = 22.7 bits (47), Expect(2) = 2e-33
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 6   LRPYTNNKLELWSKLCVSL 62
           LRPYT +KL   S  CV L
Sbjct: 60  LRPYTQHKLCYRSTACVFL 78


>emb|CAN79148.1| hypothetical protein VITISV_004343 [Vitis vinifera]
          Length = 1334

 Score =  145 bits (367), Expect(2) = 2e-33
 Identities = 92/235 (39%), Positives = 121/235 (51%), Gaps = 8/235 (3%)
 Frame = +2

Query: 47   TMC-FIGYSLNQKGYRCLHIESGRVFISRHVIFNENQFPFKGHSSSLTSPLDIPQ*FLKQ 223
            T C F+GY+   KGY CL + + R++ISR+VIF+E+ FPF+      +SP   P   L  
Sbjct: 726  TACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSFPFQS-----SSPPSSPSPHLPS 780

Query: 224  STSI---SP-LQTSSQRKXXXXXXXXXXXXXXVPTIIXXXXXXXXXXXXXXXNTHNMQTR 391
            ST     SP L   S                 +P                  NTH M TR
Sbjct: 781  STPALINSPSLSAPSSPAVSSPIITSDSXPPLIPVPFATSSPAAPSPPPLPLNTHPMVTR 840

Query: 392  AKQGIFKPKVF---HTTKHPLPHALHTILSEIPSTPTCYTQAIKDSAWKDAMVSEFNALL 562
            AK GI K + F   HTT+                 P  Y+QA K+ +W  AM SE+ ALL
Sbjct: 841  AKSGIHKKRSFIVQHTTE-----------------PRTYSQAXKNDSWVQAMNSEYQALL 883

Query: 563  KNRTWILVPPSSAQNIVDNKWVFRLKQKADGSIDKHKARLVAKGFNQQYGFDYLE 727
            +N TW LVPP S+ +IV  +W+++LK + DGSID+HKARLVA+GF Q  G DY +
Sbjct: 884  RNNTWSLVPPPSSAHIVGCRWIYKLKYRPDGSIDRHKARLVAQGFTQTPGIDYFD 938



 Score = 22.7 bits (47), Expect(2) = 2e-33
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = +3

Query: 6   LRPYTNNKLELWSKLCVSL 62
           LRPYT +KL   S  CV L
Sbjct: 713 LRPYTQHKLCYRSTACVFL 731


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