BLASTX nr result

ID: Coptis24_contig00034692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034692
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269642.2| PREDICTED: putative receptor-like protein ki...    69   5e-10
emb|CBI17206.3| unnamed protein product [Vitis vinifera]               68   7e-10
emb|CBI25221.3| unnamed protein product [Vitis vinifera]               57   2e-06

>ref|XP_002269642.2| PREDICTED: putative receptor-like protein kinase At3g47110-like
            [Vitis vinifera]
          Length = 1372

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/60 (55%), Positives = 44/60 (73%)
 Frame = -2

Query: 239  ASNNVEEQRRMENRKKDCLSSIMRIGVACSLEPIGERMDIKDVLMEMHALKRNFV*TGIH 60
            A NN+E    ME R + CL+SI RIGVACS E  G+R+DIKDV+ME++ +K+ F+  GIH
Sbjct: 1277 AINNIENHCDMEGRTQHCLASIARIGVACSEESPGDRLDIKDVVMELNIIKKVFLGAGIH 1336


>emb|CBI17206.3| unnamed protein product [Vitis vinifera]
          Length = 840

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/60 (56%), Positives = 42/60 (70%)
 Frame = -2

Query: 239 ASNNVEEQRRMENRKKDCLSSIMRIGVACSLEPIGERMDIKDVLMEMHALKRNFV*TGIH 60
           A NN+     ME R +DCL+SI RIGVACS E  G RMDIKDV+ME++ +K  F+  GIH
Sbjct: 761 AINNIANHGDMEGRMQDCLASIARIGVACSEESPGGRMDIKDVVMELNIIKEVFLGVGIH 820


>emb|CBI25221.3| unnamed protein product [Vitis vinifera]
          Length = 576

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/43 (60%), Positives = 35/43 (81%)
 Frame = -2

Query: 188 CLSSIMRIGVACSLEPIGERMDIKDVLMEMHALKRNFV*TGIH 60
           CL+SI RIGVACS E  G+R+DIKDV+ME++ +K+ F+  GIH
Sbjct: 498 CLASIARIGVACSEESPGDRLDIKDVVMELNIIKKVFLGAGIH 540


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