BLASTX nr result

ID: Coptis24_contig00034689 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034689
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141804.1| PREDICTED: protein HOTHEAD-like [Cucumis sat...    55   4e-06

>ref|XP_004141804.1| PREDICTED: protein HOTHEAD-like [Cucumis sativus]
          Length = 588

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 38/88 (43%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
 Frame = -1

Query: 255 MAFAWFLKLCHFAILL-LFSIQSGCQGAEVHLKYRYPFIKVASXXXXXXXXXXXXXXXXX 79
           MA A  +KL  F +L  L  + S CQG E  +K RYPFIK AS                 
Sbjct: 1   MALAGTVKLFLFLVLFTLLHLLSSCQGRENWIKSRYPFIKRASSF--------------- 45

Query: 78  XSTWKNRAAKK--YDYIIVGGGTAGCPL 1
              +++   +K  YDYIIVGGGTAGCPL
Sbjct: 46  ---YRDGHERKGGYDYIIVGGGTAGCPL 70


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