BLASTX nr result
ID: Coptis24_contig00034680
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00034680
(496 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004158295.1| PREDICTED: pleiotropic drug resistance prote... 94 3e-24
ref|XP_004144266.1| PREDICTED: pleiotropic drug resistance prote... 94 3e-24
dbj|BAK02156.1| predicted protein [Hordeum vulgare subsp. vulgare] 78 1e-21
ref|XP_003563764.1| PREDICTED: pleiotropic drug resistance prote... 78 2e-21
gb|AFN42936.1| pleiotropic drug resistance transporter 5 [Nicoti... 87 2e-21
>ref|XP_004158295.1| PREDICTED: pleiotropic drug resistance protein 12-like [Cucumis
sativus]
Length = 1484
Score = 94.0 bits (232), Expect(3) = 3e-24
Identities = 46/72 (63%), Positives = 54/72 (75%)
Frame = -2
Query: 414 VWMVVTYYSIGFAPEASRFFKQFLLMILFQQMAAGFF*FTVGVCRTHNISSTFGSXXXXX 235
VWMV+TYY+IGFAPEASRFFKQFLL+ L QQMA+G F F G CRT I++T GS
Sbjct: 633 VWMVMTYYTIGFAPEASRFFKQFLLVFLIQQMASGLFRFIAGCCRTMIIANTGGSLTLLI 692
Query: 234 XXXLGGFTIPRG 199
LGGFT+P+G
Sbjct: 693 VFMLGGFTLPKG 704
Score = 35.8 bits (81), Expect(3) = 3e-24
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -3
Query: 107 GIFMFTFIVQYNAISVNEFFAPRWMDK 27
G ++ YNAISVNE FAPRWM +
Sbjct: 713 GYWISPMTYSYNAISVNEMFAPRWMKR 739
Score = 26.9 bits (58), Expect(3) = 3e-24
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = -3
Query: 491 LYVSALTYTLVSNMYNSIPEQSITIS 414
+Y+ AL +T++ NM+N + ++TI+
Sbjct: 571 IYIGALIFTMMVNMFNGYADIALTIA 596
>ref|XP_004144266.1| PREDICTED: pleiotropic drug resistance protein 12-like [Cucumis
sativus]
Length = 1452
Score = 94.0 bits (232), Expect(3) = 3e-24
Identities = 46/72 (63%), Positives = 54/72 (75%)
Frame = -2
Query: 414 VWMVVTYYSIGFAPEASRFFKQFLLMILFQQMAAGFF*FTVGVCRTHNISSTFGSXXXXX 235
VWMV+TYY+IGFAPEASRFFKQFLL+ L QQMA+G F F G CRT I++T GS
Sbjct: 601 VWMVMTYYTIGFAPEASRFFKQFLLVFLIQQMASGLFRFIAGCCRTMIIANTGGSLTLLI 660
Query: 234 XXXLGGFTIPRG 199
LGGFT+P+G
Sbjct: 661 VFMLGGFTLPKG 672
Score = 35.8 bits (81), Expect(3) = 3e-24
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -3
Query: 107 GIFMFTFIVQYNAISVNEFFAPRWMDK 27
G ++ YNAISVNE FAPRWM +
Sbjct: 681 GYWISPMTYSYNAISVNEMFAPRWMKR 707
Score = 26.9 bits (58), Expect(3) = 3e-24
Identities = 9/26 (34%), Positives = 19/26 (73%)
Frame = -3
Query: 491 LYVSALTYTLVSNMYNSIPEQSITIS 414
+Y+ AL +T++ NM+N + ++TI+
Sbjct: 539 IYIGALIFTMMVNMFNGYADIALTIA 564
>dbj|BAK02156.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1512
Score = 78.2 bits (191), Expect(3) = 1e-21
Identities = 38/71 (53%), Positives = 48/71 (67%)
Frame = -2
Query: 414 VWMVVTYYSIGFAPEASRFFKQFLLMILFQQMAAGFF*FTVGVCRTHNISSTFGSXXXXX 235
VW+VVTYY++GFAPEA RFFKQ LL+ L QQMA G F G+CR+ I+ T G+
Sbjct: 649 VWVVVTYYTMGFAPEADRFFKQLLLVFLIQQMAGGLFRAIAGLCRSMIIAQTGGALFLLI 708
Query: 234 XXXLGGFTIPR 202
LGGF +P+
Sbjct: 709 FFVLGGFLLPK 719
Score = 40.0 bits (92), Expect(3) = 1e-21
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -3
Query: 107 GIFMFTFIVQYNAISVNEFFAPRWMDKKV 21
G ++ + YNA++VNEF+APRWMDK V
Sbjct: 729 GYWISPLVYGYNALAVNEFYAPRWMDKFV 757
Score = 29.6 bits (65), Expect(3) = 1e-21
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 491 LYVSALTYTLVSNMYNSIPEQSITIS 414
+YV AL +TL+ NM+N E +TI+
Sbjct: 587 VYVGALLFTLIVNMFNGFAELPLTIT 612
>ref|XP_003563764.1| PREDICTED: pleiotropic drug resistance protein 12-like
[Brachypodium distachyon]
Length = 1505
Score = 78.2 bits (191), Expect(3) = 2e-21
Identities = 38/71 (53%), Positives = 48/71 (67%)
Frame = -2
Query: 414 VWMVVTYYSIGFAPEASRFFKQFLLMILFQQMAAGFF*FTVGVCRTHNISSTFGSXXXXX 235
VW+VVTYY++GFAPEA RFFKQ LL+ L QQMA G F G+CR+ I+ T G+
Sbjct: 640 VWVVVTYYTMGFAPEADRFFKQLLLVFLIQQMAGGLFRAIAGLCRSMIIAQTGGALFLLI 699
Query: 234 XXXLGGFTIPR 202
LGGF +P+
Sbjct: 700 FFVLGGFLLPK 710
Score = 38.1 bits (87), Expect(3) = 2e-21
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = -3
Query: 107 GIFMFTFIVQYNAISVNEFFAPRWMDKKV 21
G ++ + YNA++VNEF+APRWM+K V
Sbjct: 720 GYWISPLVYGYNALAVNEFYAPRWMNKFV 748
Score = 31.2 bits (69), Expect(3) = 2e-21
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = -3
Query: 491 LYVSALTYTLVSNMYNSIPEQSITIS 414
+Y+ AL +TL+ NM+N E S+TI+
Sbjct: 578 VYIGALLFTLIVNMFNGFAELSLTIT 603
>gb|AFN42936.1| pleiotropic drug resistance transporter 5 [Nicotiana
plumbaginifolia]
Length = 1498
Score = 86.7 bits (213), Expect(4) = 2e-21
Identities = 44/76 (57%), Positives = 52/76 (68%)
Frame = -2
Query: 426 YHHFVWMVVTYYSIGFAPEASRFFKQFLLMILFQQMAAGFF*FTVGVCRTHNISSTFGSX 247
+ VWMV+TYY+IG+APEASRFFKQ LL L QQMAAG F T GVCRT I++T G+
Sbjct: 636 FETIVWMVMTYYTIGYAPEASRFFKQSLLTFLIQQMAAGLFRLTAGVCRTMIIANTGGAL 695
Query: 246 XXXXXXXLGGFTIPRG 199
L GF +PRG
Sbjct: 696 MLLLIFLLCGFILPRG 711
Score = 32.7 bits (73), Expect(4) = 2e-21
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -3
Query: 77 YNAISVNEFFAPRWMDK 27
+NA +VNE FAPRWM+K
Sbjct: 730 FNAFTVNEMFAPRWMNK 746
Score = 24.6 bits (52), Expect(4) = 2e-21
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 491 LYVSALTYTLVSNMYNSIPEQSITI 417
+YV AL + +V NM+N E ++ I
Sbjct: 578 IYVGALLFGMVINMFNGFSELAMII 602
Score = 22.3 bits (46), Expect(4) = 2e-21
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1
Query: 109 WGYSCSPLSY 80
WGY SPLSY
Sbjct: 719 WGYWVSPLSY 728